RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 BRINP1O60477 761 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 SCRG1O75711 98 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 CSN2P05814 226 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 HOXC12P31275 282 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 STAT5AP42229 794 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 ERVPABLB-1P60509 514 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 FOLH1Q04609 750 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 CHAF1BQ13112 559 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 EZH1Q92800 747 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-207ENST00000429896 CRB3Q9BUF7 120 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 TEX101Q9BY14 249 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 PTRH2Q9Y3E5 179 aaKnown RBP12.31□□□□□ -0.44
PTCH1-207ENST00000429896 SNX11Q9Y5W9 270 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 MYOCOSA0A1B0GUC4 107 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 SLCO2B1O94956 709 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 ATP4BP51164 291 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 METAP1P53582 386 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 SNAPC1Q16533 368 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 HYKKA2RU49 373 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 SGK494L7N484 410 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 CXCR6O00574 342 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 SRPX2O60687 465 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-207ENST00000429896 PGRP06401 933 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 UQCRC2P22695 453 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 ENPP2Q13822 863 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 UBAP2Q5T6F2 1119 aaKnown RBP12.31□□□□□ -0.44
PTCH1-207ENST00000429896 RTL4Q6ZR62 310 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 LPAR4Q99677 370 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 BRF2Q9HAW0 419 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 THSD7BQ9C0I4 1608 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF879B4DU55 563 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 hCG_2039718K7EN88 272 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 ARFIP1P53367 373 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 PRDX1Q06830 199 aaKnown RBP12.31□□□□□ -0.44
PTCH1-207ENST00000429896 C6orf52Q5T4I8 152 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 SLC2A7Q6PXP3 512 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 SFTPA1Q8IWL2 248 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 MFSD9Q8NBP5 474 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 RBM15BQ8NDT2 890 aaKnown RBP12.31□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF548Q8NEK5 533 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-207ENST00000429896 DNAJA3Q96EY1 480 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 OR6C1Q96RD1 312 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 TOR3AQ9H497 397 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 LDAHQ9H6V9 325 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 KCNK13Q9HB14 408 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 DMRT3Q9NQL9 472 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 CUTCQ9NTM9 273 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 DKKL1Q9UK85 242 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 FAM149AA5PLN7 773 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 LYNP07948 512 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 CERS1P27544 350 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 DNASE1L1P49184 302 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 SPANXN4Q5MJ08 99 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 SLC37A2Q8TED4 501 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 NSMCE3Q96MG7 304 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 BRD7Q9NPI1 651 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 SERGEFQ9UGK8 458 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 SPTY2D1-AS1A0A0U1RR47 76 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 A0A1W2PRG6 482 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 TLCD2A6NGC4 264 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 G3V2L1 256 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 PRDX3P30048 256 aaKnown RBP12.3□□□□□ -0.44
PTCH1-207ENST00000429896 PDPRQ8NCN5 879 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 SLC22A8Q8TCC7 542 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 BIRC8Q96P09 236 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-207ENST00000429896 NECTIN3Q9NQS3 549 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 C1GALT1Q9NS00 363 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 MALT1Q9UDY8 824 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 TBC1D29Q9UFV1 150 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 RDH16O75452 317 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 BCAS2O75934 225 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-207ENST00000429896 CHRNB1P11230 501 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 ARHGDIBP52566 201 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 SIM1P81133 766 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-207ENST00000429896 LRRC3BQ96PB8 259 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 DHRS4Q9BTZ2 278 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 CUEDC1Q9NWM3 386 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-207ENST00000429896 TRAPPC6AO75865 159 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 CPNE6O95741 557 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 PEX11BO96011 259 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 RNF144AP50876 292 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-207ENST00000429896 SMCO1Q147U7 214 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 ZFPM2Q8WW38 1151 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 COX4I2Q96KJ9 171 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 CADM1Q9BY67 442 aaKnown RBP12.3□□□□□ -0.44
PTCH1-207ENST00000429896 P2RY12Q9H244 342 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 MCCC2Q9HCC0 563 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 NAALAD2Q9Y3Q0 740 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 ARHGAP33O14559 1287 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 CLEC3AO75596 197 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 EMP2P54851 167 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 POU6F2P78424 691 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-207ENST00000429896 OR4K1Q8NGD4 311 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 SEMA6CQ9H3T2 930 aa12.3□□□□□ -0.44
PTCH1-207ENST00000429896 FLRT2O43155 660 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 AHCYL1O43865 530 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 IFNA6P05013 189 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 RPS17P08708 135 aaKnown RBP12.29□□□□□ -0.44
PTCH1-207ENST00000429896 BCKDHAP12694 445 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms