RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TRILQ7L0X0 811 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 OR4N5Q8IXE1 308 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 C9orf40Q8IXQ3 194 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 DND1Q8IYX4 353 aaKnown RBP16.04■□□□□ 0.16
MSH6-203ENST00000420813 ST13P4Q8IZP2 240 aaPredicted RBP16.04■□□□□ 0.16
MSH6-203ENST00000420813 RPRMLQ8N4K4 120 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 OR5M3Q8NGP4 307 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 KCTD4Q8WVF5 259 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 REPS1Q96D71 796 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 SORBS1Q9BX66 1292 aaKnown RBP16.04■□□□□ 0.16
MSH6-203ENST00000420813 SH2D2AQ9NP31 389 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 KCNJ16Q9NPI9 418 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 PNPLA3Q9NST1 481 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 PSD3Q9NYI0 1048 aa16.04■□□□□ 0.16
MSH6-203ENST00000420813 AQP7O14520 342 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 KLK8O60259 260 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 TOXO94900 526 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 C2P06681 752 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 GFAPP14136 432 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 ALOX15P16050 662 aaPredicted RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 PTX3P26022 381 aaPredicted RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 CASQ1P31415 396 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 PIK3CGP48736 1102 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 DNASE1L1P49184 302 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 HNRNPH2P55795 449 aaKnown RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 NUP107P57740 925 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 KRTAP10-9P60411 292 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 PMPCAQ10713 525 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 CUL3Q13618 768 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 ACAP2Q15057 778 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 PCBP2Q15366 365 aaKnown RBP eCLIP16.03■□□□□ 0.164e-9■■■■■ 31
MSH6-203ENST00000420813 SPRED3Q2MJR0 410 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 SLC22A10Q63ZE4 541 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 C18orf63Q68DL7 685 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 METTL2BQ6P1Q9 378 aaKnown RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 MYLK4Q86YV6 388 aaPredicted RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 RNF175Q8N4F7 328 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 PAQR8Q8TEZ7 354 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 SPACA9Q96E40 222 aaPredicted RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 MTERF1Q99551 399 aaKnown RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 ZNF717Q9BY31 904 aaPredicted RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 ACTR8Q9H981 624 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 NPDC1Q9NQX5 325 aaPredicted RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 LYARQ9NX58 379 aaKnown RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 TUBA8Q9NY65 449 aaPredicted RBP16.03■□□□□ 0.16
MSH6-203ENST00000420813 LIPGQ9Y5X9 500 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 HIVEP1P15822 2718 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 SPG11Q96JI7 2443 aa16.03■□□□□ 0.16
MSH6-203ENST00000420813 NKX2-6A6NCS4 301 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 FAM90A27PA6NNH2 459 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 PROM1O43490 865 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 NADKO95544 446 aaPredicted RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 MSX1P28360 303 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 GALNSP34059 522 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 RPS13P62277 151 aaKnown RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 ETF1P62495 437 aaKnown RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 IRF9Q00978 393 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 SLC10A1Q14973 349 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 TRADDQ15628 312 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 PFKFB4Q16877 469 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 MROH9Q5TGP6 573 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 MRM1Q6IN84 353 aaKnown RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 LYPD8Q6UX82 237 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 DGAT2L6Q6ZPD8 337 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 ZNF572Q7Z3I7 529 aaPredicted RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 CCDC71Q8IV32 467 aaPredicted RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 PPWD1Q96BP3 646 aaKnown RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 SARAFQ96BY9 339 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 DDX31Q9H8H2 851 aaKnown RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 SNX15Q9NRS6 342 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 ASB4Q9Y574 426 aa16.02■□□□□ 0.16
MSH6-203ENST00000420813 TNPO3Q9Y5L0 923 aaKnown RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.02■□□□□ 0.16
MSH6-203ENST00000420813 A0A0A6YYD5 115 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 IQANK1A0A1B0GTG1 560 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 HMX2A2RU54 273 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 OR6C76A6NM76 312 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 HRKO00198 91 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 HCN1O60741 890 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 WDR1O75083 606 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 KLHL2O95198 593 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 GPR75O95800 540 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 NR2F6P10588 404 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 BSGP35613 385 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 MAN2A2P49641 1150 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 HERVK_113P63132 956 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 ERVK-8P63133 956 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 GTF2H2Q13888 395 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 GTF2H2CQ6P1K8 395 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 ZNF585AQ6P3V2 769 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 KLC3Q6P597 504 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 ADGRD1Q6QNK2 874 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 B3GNT6Q6ZMB0 384 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 RNF111Q6ZNA4 994 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 SLC29A4Q7RTT9 530 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 CDH24Q86UP0 819 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 FBXW8Q8N3Y1 598 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 L3MBTL4Q8NA19 623 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 OR5M9Q8NGP3 310 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 TTYH2Q9BSA4 534 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms