RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 C1orf189Q5VU69 101 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 TANGO2Q6ICL3 276 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 FIGLAQ6QHK4 219 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 TMEM126BQ8IUX1 230 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 RASGEF1AQ8N9B8 481 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 LKAAEAR1Q8TD35 194 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 FAM3CQ92520 227 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 CIDECQ96AQ7 238 aaPredicted RBP12.63□□□□□ -0.39
BDNF-208ENST00000418212 DTD2Q96FN9 168 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 TM9SF2Q99805 663 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 PDE7BQ9NP56 450 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 CLEC4EQ9ULY5 219 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 CFL2Q9Y281 166 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 FAM172BPA6NC97 362 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 C11orf98E9PRG8 122 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 ABCB7O75027 752 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 CSTAP01040 98 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 ALDOCP09972 364 aaKnown RBP12.63□□□□□ -0.39
BDNF-208ENST00000418212 HSD17B1P14061 328 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 AGXTP21549 392 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 GPX3P22352 226 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 ARFIP1P53367 373 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 TUBA1BP68363 451 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 E2F2Q14209 437 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 CTSL3PQ5NE16 218 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 TUBA1AQ71U36 451 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 RAB43Q86YS6 212 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 THEM6Q8WUY1 208 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 COQ8BQ96D53 544 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 TRIB3Q96RU7 358 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 GDE1Q9NZC3 331 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 PCDHGA2Q9Y5H1 932 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 MAU2Q9Y6X3 613 aa12.63□□□□□ -0.39
BDNF-208ENST00000418212 SOX1O00570 391 aaPredicted RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 SCO2O43819 266 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 PEX14O75381 377 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 OR2B3O76000 313 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 RPS3P23396 243 aaKnown RBP eCLIP12.62□□□□□ -0.39
BDNF-208ENST00000418212 ATP5A1P25705 553 aaKnown RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 POU6F2P78424 691 aaPredicted RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 MGAT3Q09327 533 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 SLC25A24Q6NUK1 477 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 CNTN4Q8IWV2 1026 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 KLHL36Q8N4N3 616 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 ZNF784Q8NCA9 323 aaPredicted RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 UBXN10Q96LJ8 280 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 KCTD7Q96MP8 289 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 NBASA2RRP1 2371 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 HMX2A2RU54 273 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 CAPN14A8MX76 684 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 PLD2O14939 933 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 SCAMP2O15127 329 aaKnown RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 TLX3O43711 291 aaPredicted RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 AKAP8O43823 692 aaKnown RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 CDRT1O95170 752 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 RENP00797 406 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 PVRP15151 417 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 HMGA1P17096 107 aaKnown RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 ACSL1P33121 698 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 CSTF1Q05048 431 aaKnown RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 DNASE1L3Q13609 305 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 C10orf62Q5T681 223 aaPredicted RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 ZNF773Q6PK81 442 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 ZNF740Q8NDX6 193 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 WBP2Q969T9 261 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 ZNF696Q9H7X3 374 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 ZBTB20Q9HC78 741 aaPredicted RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 DDX60Q8IY21 1712 aaKnown RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 C1orf226A1L170 272 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 SLC22A1O15245 554 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 ECDO95905 644 aaPredicted RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 ITGB7P26010 798 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 RBBP4Q09028 425 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 NPRL3Q12980 569 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 DCDC5Q6ZRR9 648 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 C9orf43Q8TAL5 461 aaPredicted RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 ITPAQ9BY32 194 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 YTHDF1Q9BYJ9 559 aaKnown RBP12.62□□□□□ -0.39
BDNF-208ENST00000418212 ERVK-18Q9QC07 812 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 SARDHQ9UL12 918 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 GPR34Q9UPC5 381 aa12.62□□□□□ -0.39
BDNF-208ENST00000418212 CCRL2O00421 344 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 EIF1AYO14602 144 aaKnown RBP12.61□□□□□ -0.39
BDNF-208ENST00000418212 B4GALT3O60512 393 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 MT-ND2P03891 347 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 STSP08842 583 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 HNRNPA2B1P22626 353 aaKnown RBP12.61□□□□□ -0.39
BDNF-208ENST00000418212 PIN1Q13526 163 aaPredicted RBP12.61□□□□□ -0.39
BDNF-208ENST00000418212 TPRG1LQ5T0D9 272 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 ZC3H14Q6PJT7 736 aaKnown RBP12.61□□□□□ -0.39
BDNF-208ENST00000418212 Q6ZNX1 250 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 CYP4V2Q6ZWL3 525 aaPredicted RBP12.61□□□□□ -0.39
BDNF-208ENST00000418212 WDR53Q7Z5U6 358 aaPredicted RBP12.61□□□□□ -0.39
BDNF-208ENST00000418212 GALNT12Q8IXK2 581 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 METTL25Q8N6Q8 603 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 OR4K17Q8NGC6 315 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 C1orf216Q8TAB5 229 aa12.61□□□□□ -0.39
BDNF-208ENST00000418212 PROKR1Q8TCW9 393 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms