RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 MIS12Q9H081 205 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 TKTL2Q9H0I9 626 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC6A17Q9H1V8 727 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 GANQ9H2C0 597 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ADAMTS10Q9H324 1103 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 LRRN3Q9H3W5 708 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ANKRA2Q9H9E1 313 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ACTR5Q9H9F9 607 aaPredicted RBP2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 TBC1D17Q9HA65 648 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 SAP30LQ9HAJ7 183 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 PARVBQ9HBI1 364 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ABCB10Q9NRK6 738 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 MRPL17Q9NRX2 175 aaKnown RBP2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ECHDC1Q9NTX5 307 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF701Q9NV72 531 aaPredicted RBP2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ADA2Q9NZK5 511 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 FLRT1Q9NZU1 646 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC17A7Q9P2U7 560 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 RBPJLQ9UBG7 517 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 P2RX2Q9UBL9 471 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 EPHA6Q9UF33 1036 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 OR14J1Q9UGF5 321 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 CLEC2DQ9UHP7 191 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 SERTAD3Q9UJW9 196 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 ICKQ9UPZ9 632 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 TNNQ9UQP3 1299 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 B3GNT3Q9Y2A9 372 aa2.94□□□□□ -1.94
CTDSPL-203ENST00000416688 SPATA31A6Q5VVP1 1343 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM265A0A087WTH1 108 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 PPIAL4CA0A0B4J2A2 164 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 ZC3H12DA2A288 527 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM213A2RRL7 107 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 ZAR1LA6NP61 321 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 ERI2A8K979 691 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 C9orf172C9J069 976 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 FAM157AC9JC47 383 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 NPIPB6E9PJ23 425 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 PRAMEF26H0Y7S4 382 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 RAB29O14966 203 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 ARPC1BO15143 372 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 PPM1DO15297 605 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 MID1O15344 667 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 EIF3HO15372 352 aaKnown RBP eCLIP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC16A5O15375 505 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 NBR2O15453 112 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 RS1O15537 224 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 ZSCAN12O43309 604 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 SUV39H1O43463 412 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 B4GAT1O43505 415 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 XRCC3O43542 346 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 BUD23O43709 281 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 N4BP1O75113 896 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 CNOT3O75175 753 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 GRAP2O75791 330 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 CNTN5O94779 1100 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 CST4P01036 141 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 CST1P01037 141 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 TGFB1P01137 390 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 CRYABP02511 175 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 TNNC2P02585 160 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 ESR1P03372 595 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 RPN2P04844 631 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 IFNA6P05013 189 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 GPIP06744 558 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 KRT16P08779 473 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 DBHP09172 617 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 GSTA2P09210 222 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 TRIM49P0CI25 452 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 TRIM49CP0CI26 452 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC35E2BP0CK96 405 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC35E2P0CK97 266 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 PPIAL4GP0DN37 164 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 CETPP11597 493 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 FGF5P12034 268 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 FCER1AP12319 257 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 GLB1P16278 677 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 EPCAMP16422 314 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 SYT1P21579 422 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 S100A1P23297 94 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 GTF2E2P29084 291 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 HNRNPH3P31942 346 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 AHRP35869 848 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC1A2P43004 574 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 KIR3DL2P43630 455 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 GYG1P46976 350 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 OR3A1P47881 315 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 NPBWR2P48146 333 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 RFX3P48380 749 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 TGM4P49221 684 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 AGTR2P50052 363 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 TNFSF10P50591 281 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 CYP2J2P51589 502 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 NDST2P52849 883 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 COPB1P53618 953 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 MAPK12P53778 367 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 GEMP55040 296 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 AP3S2P59780 193 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 BPIFB4P59827 614 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 ARF6P62330 175 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms