RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 SOHLH2Q9NX45 425 aa9.43□□□□□ -0.9
DDB1-202ENST00000414411 ADGRE2Q9UHX3 823 aa9.43□□□□□ -0.9
DDB1-202ENST00000414411 PLCL2Q9UPR0 1127 aa9.43□□□□□ -0.9
DDB1-202ENST00000414411 MAN2B2Q9Y2E5 1009 aa9.43□□□□□ -0.9
DDB1-202ENST00000414411 AP3M1Q9Y2T2 418 aa9.43□□□□□ -0.9
DDB1-202ENST00000414411 TMED5Q9Y3A6 229 aa9.43□□□□□ -0.9
DDB1-202ENST00000414411 PTPRBP23467 1997 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 A0A096LPI6 279 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ELOVL7A1L3X0 281 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ANKDD1BA6NHY2 528 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 TRIM64CA6NLI5 447 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 MAGEB17A8MXT2 336 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 GSTA4O15217 222 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ERN1O75460 977 aaKnown RBP9.42□□□□□ -0.9
DDB1-202ENST00000414411 CLEC3AO75596 197 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 BMP10O95393 424 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ACPPP15309 386 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 PCSK2P16519 638 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 HOXB9P17482 250 aaPredicted RBP9.42□□□□□ -0.9
DDB1-202ENST00000414411 SDC1P18827 310 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 SERPINB1P30740 379 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 PLA2G5P39877 138 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ARL4DP49703 201 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 PHC1P78364 1004 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 CHRNB3Q05901 458 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 MAP7Q14244 749 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ADPRMQ3LIE5 342 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 GTDC1Q4AE62 458 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
DDB1-202ENST00000414411 LRIF1Q5T3J3 769 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 HES3Q5TGS1 186 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 TMEM214Q6NUQ4 689 aaKnown RBP9.42□□□□□ -0.9
DDB1-202ENST00000414411 TTC33Q6PID6 262 aaPredicted RBP9.42□□□□□ -0.9
DDB1-202ENST00000414411 B3GNT6Q6ZMB0 384 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ZNF786Q8N393 782 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 RNF175Q8N4F7 328 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ARHGEF39Q8N4T4 335 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 DHRSXQ8N5I4 330 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 FAM86B1Q8N7N1 296 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 AGBL5Q8NDL9 886 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 OR52E4Q8NGH9 312 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ADAMTS14Q8WXS8 1223 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 TESCQ96BS2 214 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 ZNF501Q96CX3 271 aaPredicted RBP9.42□□□□□ -0.9
DDB1-202ENST00000414411 CPPED1Q9BRF8 314 aaPredicted RBP9.42□□□□□ -0.9
DDB1-202ENST00000414411 AICDAQ9GZX7 198 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 PAIP1Q9H074 479 aaKnown RBP9.42□□□□□ -0.9
DDB1-202ENST00000414411 KAT8Q9H7Z6 458 aaKnown RBP9.42□□□□□ -0.9
DDB1-202ENST00000414411 BRF2Q9HAW0 419 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 SLC6A13Q9NSD5 602 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 OCIAD1Q9NX40 245 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 CLCA2Q9UQC9 943 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 CEPT1Q9Y6K0 416 aa9.42□□□□□ -0.9
DDB1-202ENST00000414411 SCN3AQ9NY46 2000 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 DCDC2BA2VCK2 349 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 LRIT2A6NDA9 550 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 FAM220BPB1ANY3 271 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 P2RX6O15547 441 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 CSO75390 466 aaKnown RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 SCELO95171 688 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 ETHE1O95571 254 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 SNAP29O95721 258 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 CLIC3O95833 236 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 PCNAP12004 261 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 HSD3B1P14060 373 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 CDH2P19022 906 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 TACR1P25103 407 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 MAPK1P28482 360 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 CSTF2P33240 577 aaKnown RBP eCLIP9.41□□□□□ -0.9
DDB1-202ENST00000414411 S100A3P33764 101 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 ARSFP54793 590 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 CDH15P55291 814 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 DYNC1I2Q13409 638 aaKnown RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 ELOAQ14241 798 aaKnown RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 GPR19Q15760 415 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 PRTGQ2VWP7 1150 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 DEFB110Q30KQ9 67 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 MANEAQ5SRI9 462 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 TBPL2Q6SJ96 375 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 ENPP6Q6UWR7 440 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 USP51Q70EK9 711 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 PATL1Q86TB9 770 aaKnown RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 TMPRSS12Q86WS5 348 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 MICU2Q8IYU8 434 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 ALDH16A1Q8IZ83 802 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 NT5CQ8TCD5 201 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 TMBIM1Q969X1 311 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 FAM122AQ96E09 287 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 LIN37Q96GY3 246 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 FRMD6Q96NE9 622 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 TSSK3Q96PN8 268 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 SH3GL3Q99963 347 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 MACROD1Q9BQ69 325 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 MS4A8Q9BY19 250 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 UGT2B28Q9BY64 529 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 SLC6A16Q9GZN6 736 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 DMRT3Q9NQL9 472 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 FGF21Q9NSA1 209 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 TUBA8Q9NY65 449 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 PCDHB14Q9Y5E9 798 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms