RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 COMMD6Q7Z4G1 85 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 PSD4Q8NDX1 1056 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 RNF38Q9H0F5 515 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 MTG2Q9H4K7 406 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 PCDHGB6Q9Y5F9 930 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 HPRP00739 348 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 HOXD8P13378 290 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-202ENST00000413872 HOXA9P31269 272 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF140P52738 457 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ACTC1P68032 377 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ACTA1P68133 377 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 TUBA1BP68363 451 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 TUBA4AP68366 448 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 CHAF1BQ13112 559 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 TUBA1AQ71U36 451 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 HSD11B1LQ7Z5J1 315 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 OMA1Q96E52 524 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 MAGIXQ9H6Y5 334 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF334Q9HCZ1 680 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-202ENST00000413872 OR6C2Q9NZP2 312 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 A0A0G2JPF8 293 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 HNRNPCL3B7ZW38 293 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ACOT7O00154 380 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 SOX14O95416 240 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 HNRNPCL4P0DMR1 293 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 GJA4P35212 333 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 SHC2P98077 582 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 GINS1Q14691 196 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 UNQ6126/PRO20091Q6UXV3 157 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 TMEM130Q8N3G9 435 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF784Q8NCA9 323 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-202ENST00000413872 CCDC107Q8WV48 283 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 FAM129BQ96TA1 746 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ZBP1Q9H171 429 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ACTR10Q9NZ32 417 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 FAM172BPA6NC97 362 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 MTRF1O75570 445 aaKnown RBP16.5■□□□□ 0.23
PHRF1-202ENST00000413872 IL1RNP18510 177 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 HORMAD2Q8N7B1 307 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 OR52N2Q8NGI0 321 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 OR2L2Q8NH16 312 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 HTRA1Q92743 480 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 PEX11GQ96HA9 241 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF559Q9BR84 538 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 IGSF5Q9NSI5 407 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 OBP2AQ9NY56 170 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 SDC3O75056 442 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 FAM189BP81408 668 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 UTS2BQ765I0 119 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 TCEANCQ8N8B7 351 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 HHIPQ96QV1 700 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 GNG8Q9UK08 70 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 MYO9BQ13459 2157 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 UNC119BA6NIH7 251 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 VSTM2BA6NLU5 285 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 H0YAE9 185 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 CER1O95813 267 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 FGF4P08620 206 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 ABCA11PQ4W5N1 156 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 CES4AQ5XG92 561 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF627Q7L945 461 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF227Q86WZ6 799 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 OR5AR1Q8NGP9 310 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 RHBDD1Q8TEB9 315 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 GLS2Q9UI32 602 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 ADAM12O43184 909 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 NUAK1O60285 661 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 CTBP2P56545 445 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 NR0B2Q15466 257 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 LRRC26Q2I0M4 334 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 CYP27C1Q4G0S4 372 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 FAM78AQ5JUQ0 283 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 GPAT4Q86UL3 456 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.5■□□□□ 0.235e-7■■■■□ 25.5
PHRF1-202ENST00000413872 JAGN1Q8N5M9 183 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 SGTBQ96EQ0 304 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 TOR3AQ9H497 397 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 MARCH7Q9H992 704 aa16.5■□□□□ 0.23
PHRF1-202ENST00000413872 RTCAO00442 366 aaKnown RBP16.49■□□□□ 0.23
PHRF1-202ENST00000413872 PEPDP12955 493 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 CLCN2P51788 898 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 AFF1P51825 1210 aaKnown RBP16.49■□□□□ 0.23
PHRF1-202ENST00000413872 PPP1R8Q12972 351 aaKnown RBP16.49■□□□□ 0.23
PHRF1-202ENST00000413872 MOGSQ13724 837 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 MYRFLQ96LU7 910 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 GORASP1Q9BQQ3 440 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 HTR3EA5X5Y0 456 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 VILLO15195 856 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 PROM1O43490 865 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 KDM4BO94953 1096 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 NUDT6P53370 316 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 YPEL5P62699 121 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 ALDH16A1Q8IZ83 802 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 MFSD2AQ8NA29 543 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 HSPBAP1Q96EW2 488 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 ACTRT3Q9BYD9 372 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 MTHFD2LQ9H903 347 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-202ENST00000413872 CCM2LQ9NUG4 571 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms