RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 GIMAP2Q9UG22 337 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ADAM29Q9UKF5 820 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ACAD8Q9UKU7 415 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 BAIAP2Q9UQB8 552 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 PCDHGA1Q9Y5H4 931 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 CCDC163A0A0D9SF12 145 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 CXCR6O00574 342 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 TP73O15350 636 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 SSNA1O43805 119 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 RAP2AP10114 183 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 UQCRC2P22695 453 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 AQP1P29972 269 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 CCINQ13939 588 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 GBX1Q14549 363 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 TSSK4Q6SA08 328 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 CASP12Q6UXS9 341 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 RANBP3LQ86VV4 465 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 LRRC25Q8N386 305 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 GALNT6Q8NCL4 622 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 OR2L3Q8NG85 312 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 OR9I1Q8NGQ6 314 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 TM7SF3Q9NS93 570 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 SAMHD1Q9Y3Z3 626 aaKnown RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 A0A096LPI6 279 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 G3V2T6 193 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 FAM20BO75063 409 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 SMNDC1O75940 238 aaKnown RBP eCLIP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 CPNE6O95741 557 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 IL7RP16871 459 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 NOS3P29474 1203 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 PRDX3P30048 256 aaKnown RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ARHGDIBP52566 201 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 MTPNP58546 118 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 TAS2R41P59536 307 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 CDC42P60953 191 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 PPP1R3AQ16821 1122 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ARMC4Q5T2S8 1044 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ANKRD26P1Q6NSI1 321 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 SLCO4C1Q6ZQN7 724 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 AMIGO2Q86SJ2 522 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 MFSD9Q8NBP5 474 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ZNF563Q8TA94 476 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 SEMA6CQ9H3T2 930 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ZFR2Q9UPR6 939 aaKnown RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 HMX2A2RU54 273 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 H0YJX3 145 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 H3BN98 237 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ADAM23O75077 832 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ALPPP05187 535 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 PORP16435 677 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 IL1RNP18510 177 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 HOXD12P35452 270 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 SLC19A1P41440 591 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 CSNK2BP67870 215 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 TRAF3Q13114 568 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 FADDQ13158 208 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 BATFQ16520 125 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 DECR1Q16698 335 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 GFOD2Q3B7J2 385 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 LPCAT4Q643R3 524 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ZNF605Q86T29 641 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 SPPL2CQ8IUH8 684 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 LILRA3Q8N6C8 439 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 C19orf47Q8N9M1 422 aaKnown RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 C16orf78Q8WTQ4 265 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 OR52A5Q9H2C5 316 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 EXO5Q9H790 373 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 NT5DC2Q9H857 520 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ITGB1BP2Q9UKP3 347 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 HCN4Q9Y3Q4 1203 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 AK5Q9Y6K8 562 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 OR5K3A6NET4 321 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 TRIM64CA6NLI5 447 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 A8MUA0 341 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 UGT2B17O75795 530 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 C6orf47O95873 294 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 C7P10643 843 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 NME1P15531 152 aaKnown RBP8.11□□□□□ -1.11
SYNE1-211ENST00000413186 CCKBRP32239 447 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 TUBA1BP68363 451 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 HSD11B2P80365 405 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 IFI44LQ53G44 452 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 MANEAQ5SRI9 462 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 SLC2A7Q6PXP3 512 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 DEF8Q6ZN54 512 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 TUBA1AQ71U36 451 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 OR52L1Q8NGH7 329 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 GRPEL2Q8TAA5 225 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 SORT1Q99523 831 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 ANK1P16157 1881 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 NPIPA5A0A0B4J1W7 369 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 TARM1B6A8C7 271 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 RTCAO00442 366 aaKnown RBP8.11□□□□□ -1.11
SYNE1-211ENST00000413186 EMC8O43402 210 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 APOC1P02654 83 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 FHP07954 510 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 ENDOUP21128 410 aaKnown RBP8.11□□□□□ -1.11
SYNE1-211ENST00000413186 UGT2B15P54855 530 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 SPIBQ01892 262 aa8.11□□□□□ -1.11
SYNE1-211ENST00000413186 SCARB2Q14108 478 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms