RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CCDC153Q494R4 210 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 ZNF658BQ4V348 819 aaPredicted RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 FASTKD1Q53R41 847 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PCID2Q5JVF3 399 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 INTS11Q5TA45 600 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 LYPLAL1Q5VWZ2 237 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 ANKRD22Q5VYY1 191 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 LPCAT4Q643R3 524 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PWWP2BQ6NUJ5 590 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 NIPAL1Q6NVV3 410 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 AFTPHQ6ULP2 937 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 HACD2Q6Y1H2 254 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PATL1Q86TB9 770 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 GPR180Q86V85 440 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 CAND1Q86VP6 1230 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 GLCCI1Q86VQ1 547 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 AMIGO1Q86WK6 493 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PGAM4Q8N0Y7 254 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 SCAIQ8N9R8 606 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PPHLN1Q8NEY8 458 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 OR52E1Q8NGJ3 308 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 OR13J1Q8NGT2 312 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 OR4L1Q8NH43 312 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 OR8K5Q8NH50 307 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PPP1R14CQ8TAE6 165 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 RDH11Q8TC12 318 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 CT55Q8WUE5 264 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 TRUB1Q8WWH5 349 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PYDC1Q8WXC3 89 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 ELMO1Q92556 727 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 TFGQ92734 400 aaPredicted RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 CLPTM1LQ96KA5 538 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PPM1MQ96MI6 270 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 ZNF778Q96MU6 729 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 RILPQ96NA2 401 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 SORT1Q99523 831 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 OLFM1Q99784 485 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 EBNA1BP2Q99848 306 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PSD2Q9BQI7 771 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 NEURL2Q9BR09 285 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 HGH1Q9BTY7 390 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 NUF2Q9BZD4 464 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 C20orf27Q9GZN8 174 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 TFB2MQ9H5Q4 396 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 CLK4Q9HAZ1 481 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 LHX9Q9NQ69 397 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PNPLA3Q9NST1 481 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 STARD5Q9NSY2 213 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 ARMC1Q9NVT9 282 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 SLC2A6Q9UGQ3 507 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 KCND3Q9UK17 655 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 PADI1Q9ULC6 663 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 RIMKLBQ9ULI2 386 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 ASF1AQ9Y294 204 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 BTRCQ9Y297 605 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 RNF11Q9Y3C5 154 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 AP4S1Q9Y587 144 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 MRPS18BQ9Y676 258 aaKnown RBP5.04□□□□□ -1.6
LINC00342-201ENST00000412393 NUP210LQ5VU65 1888 aa5.04□□□□□ -1.6
LINC00342-201ENST00000412393 ZNF462Q96JM2 2506 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SMG1Q96Q15 3661 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SPTA1P02549 2419 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 KALRNO60229 2985 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 TCRBV7S3A2A0A539 114 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SLC5A10A0PJK1 596 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 PIPSLA2A3N6 862 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 C2orf74A8MZ97 194 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 AP3B1O00203 1094 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 BTN3A1O00481 513 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SUSD5O60279 629 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 OR1I1O60431 355 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 CREG1O75629 220 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SCRG1O75711 98 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SULT1C4O75897 302 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 PDE5AO76074 875 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 USP1O94782 785 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 PGM3O95394 542 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 APOA4P06727 396 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 PVRP15151 417 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ST6GAL1P15907 406 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ATF4P18848 351 aaPredicted RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 S100A1P23297 94 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ME2P23368 584 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 DCKP27707 260 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ACADLP28330 430 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SLC7A1P30825 629 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SHMT2P34897 504 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 NPY2RP49146 381 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 CSE1LP55060 971 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 TMBIM6P55061 237 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SESN2P58004 480 aaPredicted RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 KRTAP10-9P60411 292 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ABCE1P61221 599 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ESRRGP62508 458 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 RPS15P62841 145 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 BASP1P80723 227 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SLC25A3Q00325 362 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ERV3-1Q14264 604 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SEMA3AQ14563 771 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 PCOLCEQ15113 449 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms