RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 AADACL4Q5VUY2 407 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 LYSMD4Q5XG99 296 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 LAIR1Q6GTX8 287 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 NANOGP8Q6NSW7 305 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 AADACL2Q6P093 401 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 LAYNQ6UX15 382 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 GLDNQ6ZMI3 551 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RFX6Q8HWS3 928 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 TMEM126BQ8IUX1 230 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PSTKQ8IV42 348 aaKnown RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ABCA7Q8IZY2 2146 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 LINC00518Q8N0U6 118 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SHISA5Q8N114 240 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 LILRA2Q8N149 483 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RASGEF1CQ8N431 466 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ATPAF2Q8N5M1 289 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 METTL25Q8N6Q8 603 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PCDH20Q8N6Y1 951 aaKnown RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 LRRC57Q8N9N7 239 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 TMIEQ8NEW7 156 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 OR7G3Q8NG95 312 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 OR52E1Q8NGJ3 308 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PPP4R1Q8TF05 950 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RAB40AQ8WXH6 277 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 OR8D1Q8WZ84 308 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PIGKQ92643 395 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ALG3Q92685 438 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 BCL2L2Q92843 193 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 VOPP1Q96AW1 172 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 FAF2Q96CS3 445 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MMABQ96EY8 250 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MISP3Q96FF7 219 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 C5orf30Q96GV9 206 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF486Q96H40 463 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 HES6Q96HZ4 224 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 TXNDC15Q96J42 360 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 FAR2Q96K12 515 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 CAPZA3Q96KX2 299 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PWWP2AQ96N64 755 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SLC46A1Q96NT5 459 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RANBP9Q96S59 729 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PKP2Q99959 881 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SEMA3CQ99985 751 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 CCDC77Q9BR77 488 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF670Q9BS34 389 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 NDC1Q9BTX1 674 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 TLR10Q9BXR5 811 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ROPN1BQ9BZX4 212 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 OR2B2Q9GZK3 357 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF350Q9GZX5 532 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 WNT5BQ9H1J7 359 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 NEUROG2Q9H2A3 272 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ARRDC1-AS1Q9H2J1 176 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 OR51B5Q9H339 312 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PLK3Q9H4B4 646 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RAD21L1Q9H4I0 556 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 C6orf106Q9H6K1 298 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ROPN1Q9HAT0 212 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SIAEQ9HAT2 523 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 S100A14Q9HCY8 104 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 GCM1Q9NP62 436 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PARD6AQ9NPB6 346 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 DNAJC11Q9NVH1 559 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 TRNAU1APQ9NX07 287 aaKnown RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 P4HTMQ9NXG6 502 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 FBXL12Q9NXK8 326 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 HAO2Q9NYQ3 351 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 LHX3Q9UBR4 397 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RSL24D1Q9UHA3 163 aaKnown RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 IPO11Q9UI26 975 aaKnown RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 GMEB2Q9UKD1 530 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RAB23Q9ULC3 237 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 GUCA1BQ9UMX6 200 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SHOC2Q9UQ13 582 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ALG6Q9Y672 507 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 CACNG2Q9Y698 323 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF292O60281 2723 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 hCG_1818297A0A087WSY0 165 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 HMX2A2RU54 273 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 FAM90A8PA6NJQ4 464 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 BTNL10A8MVZ5 291 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 FOXO6A8MYZ6 492 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 C1QTNF3-AMACRE9PGA6 284 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 KCNK1O00180 336 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SOCS6O14544 535 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 NUDT21O43809 227 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 NUAK1O60285 661 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 USP12O75317 370 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF217O75362 1048 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 MTX2O75431 263 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 KRT36O76013 467 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 HAUS5O94927 633 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 TNFAIP8O95379 198 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SEMA4FO95754 770 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 IGSF6O95976 241 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 GAS8O95995 478 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PEX11BO96011 259 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 GSRP00390 522 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms