RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TIE1P35590 1138 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 GGT2P36268 569 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 SPATC1Q76KD6 591 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 PRSS48Q7RTY5 328 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 PIP5K1AQ99755 562 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 C17orf62Q9BQA9 187 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 HOXD1Q9GZZ0 328 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 DCSTAMPQ9H295 470 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 FZD3Q9NPG1 666 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 ZFR2Q9UPR6 939 aaKnown RBP22.56■■□□□ 1.2
PABPN1-202ENST00000397276 IFNA14P01570 189 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 POU2F2P09086 479 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 ERGP11308 486 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 LIPAP38571 399 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 KRT33BQ14525 404 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 PUM1Q14671 1186 aaKnown RBP eCLIP22.56■■□□□ 1.2
PABPN1-202ENST00000397276 REEP3Q6NUK4 255 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 ZNF556Q9HAH1 456 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 ICKQ9UPZ9 632 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 MUC22E2RYF6 1773 aaPredicted RBP22.56■■□□□ 1.2
PABPN1-202ENST00000397276 C2orf16Q68DN1 1984 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 ANXA8P13928 327 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 HOXB3P14651 431 aaPredicted RBP22.55■■□□□ 1.2
PABPN1-202ENST00000397276 POU1F1P28069 291 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 XCR1P46094 333 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 ARHGAP19Q14CB8 494 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 OLIG3Q7RTU3 272 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 C6orf120Q7Z4R8 191 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 SVOPQ8N4V2 548 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 TMEM19Q96HH6 336 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 RPP25Q9BUL9 199 aaKnown RBP22.55■■□□□ 1.2
PABPN1-202ENST00000397276 PELI2Q9HAT8 420 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 THSD1Q9NS62 852 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 QPCTLQ9NXS2 382 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 PCDHGA2Q9Y5H1 932 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 RECKO95980 971 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 PBX2P40425 430 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 HMGN2P46Q86SG4 172 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 JPH3Q8WXH2 748 aaPredicted RBP22.55■■□□□ 1.2
PABPN1-202ENST00000397276 RSPO3Q9BXY4 272 aaPredicted RBP22.55■■□□□ 1.2
PABPN1-202ENST00000397276 TP63Q9H3D4 680 aaPredicted RBP22.55■■□□□ 1.2
PABPN1-202ENST00000397276 CCNB1IP1Q9NPC3 277 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 WASH6PQ9NQA3 447 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 AP1M2Q9Y6Q5 423 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 FAM47E-STBD1D6RA91 191 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 NDUFS4O43181 175 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 DBTP11182 482 aaKnown RBP22.55■■□□□ 1.2
PABPN1-202ENST00000397276 DUSP6Q16828 381 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 C2orf27AQ580R0 203 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 DESI1Q6ICB0 168 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 TAGAPQ8N103 731 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 AQP11Q8NBQ7 271 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 VANGL1Q8TAA9 524 aaPredicted RBP22.55■■□□□ 1.2
PABPN1-202ENST00000397276 OR5P2Q8WZ92 322 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 MTIF3Q9H2K0 278 aaKnown RBP22.55■■□□□ 1.2
PABPN1-202ENST00000397276 GPR83Q9NYM4 423 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 GDE1Q9NZC3 331 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 POFUT2Q9Y2G5 429 aa22.55■■□□□ 1.2
PABPN1-202ENST00000397276 IGKV1-8A0A0C4DH67 115 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 GASTP01350 101 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 IFNW1P05000 195 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 ALPPL2P10696 532 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 LIM2P55344 173 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 CSNK1G2P78368 415 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 UBE3DQ7Z6J8 389 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 NUDT13Q86X67 352 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 TEX101Q9BY14 249 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 KLHL31Q9H511 634 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 ENPP4Q9Y6X5 453 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 GDI1P31150 447 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 REEP5Q00765 189 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 LINC00299Q6ZSB3 139 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 RBM45Q8IUH3 476 aaKnown RBP22.54■■□□□ 1.2
PABPN1-202ENST00000397276 RGMAQ96B86 450 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 TEFMQ96QE5 360 aaKnown RBP22.54■■□□□ 1.2
PABPN1-202ENST00000397276 GPSM3Q9Y4H4 160 aa22.54■■□□□ 1.2
PABPN1-202ENST00000397276 NINQ8N4C6 2090 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 CCDC88CQ9P219 2028 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 SSX4O60224 188 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 SEMA3DO95025 777 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 S100A1P23297 94 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 CLK1P49759 484 aaKnown RBP22.53■■□□□ 1.2
PABPN1-202ENST00000397276 SAXO2Q658L1 398 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 OR5D16Q8NGK9 328 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 OR14C36Q8NHC7 312 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 IPCEF1Q8WWN9 437 aaPredicted RBP22.53■■□□□ 1.2
PABPN1-202ENST00000397276 GGHQ92820 318 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 NEURL3Q96EH8 262 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 PDXPQ96GD0 296 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 WFDC6Q9BQY6 131 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 IMPAD1Q9NX62 359 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 ZNF226Q9NYT6 803 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 KLHL20Q9Y2M5 609 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 PDZK1P1A8MUH7 402 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 E9PQ18 207 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 CCNB2O95067 398 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 DNTTP04053 509 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 GRK3P35626 688 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 SSR2P43308 183 aa22.53■■□□□ 1.2
PABPN1-202ENST00000397276 LEXMQ3ZCV2 418 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms