RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 AHRRA9YTQ3 701 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 DVL2O14641 736 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 CLGNO14967 610 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 DYRK3O43781 588 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF354AO60765 605 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 BANF1O75531 89 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 CELA3AP09093 270 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 CCL3P10147 92 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 COX7A2P14406 83 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 CERS1P27544 350 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 DNASE1L1P49184 302 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 LAPTM5Q13571 262 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 TSNQ15631 228 aaKnown RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 CEBPEQ15744 281 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 HIST2H2ACQ16777 129 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF791Q3KP31 576 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 FBXL19-AS1Q494R0 122 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 STEAP4Q687X5 459 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 HIST2H2AA3Q6FI13 130 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 TRMT10BQ6PF06 316 aaKnown RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 C20orf204Q6ZNR8 217 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 FRA10AC1Q70Z53 315 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 VN1R5Q7Z5H4 357 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 WDR53Q7Z5U6 358 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 CDC20BQ86Y33 519 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 DND1Q8IYX4 353 aaKnown RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 TCAIMQ8N3R3 496 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 FBXW8Q8N3Y1 598 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF321PQ8N8H1 164 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 NUBPLQ8TB37 319 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 SLC2A12Q8TD20 617 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 PAQR8Q8TEZ7 354 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 WDR34Q96EX3 536 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 RMND5BQ96G75 393 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 RBM18Q96H35 190 aaKnown RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 SENP5Q96HI0 755 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 F2RL3Q96RI0 385 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 EFCAB11Q9BUY7 163 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 CNPPD1Q9BV87 410 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 EXO5Q9H790 373 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 CNOT10Q9H9A5 744 aaKnown RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 POPDC3Q9HBV1 291 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 SH2D2AQ9NP31 389 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 ZFP64Q9NPA5 681 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 SEMA4BQ9NPR2 832 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 DLL4Q9NR61 685 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 CRIM1Q9NZV1 1036 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 SLC17A6Q9P2U8 582 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 COPS7AQ9UBW8 275 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF629Q9UEG4 869 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 ASIC3Q9UHC3 531 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 FOXD3Q9UJU5 478 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 LIPGQ9Y5X9 500 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 SPACA6W5XKT8 324 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 MPDZO75970 2070 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 VPS13CQ709C8 3753 aa8.07□□□□□ -1.12
CAPN3-208ENST00000397204 GOLGA6L10A0A0M3HER8 536 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 NPEPPSL1A6NEC2 478 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 A6NNC1 897 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 TAPBPO15533 448 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 LDB3O75112 727 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ETHE1O95571 254 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 EPPINO95925 133 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 IGKV3-11P04433 115 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ATP5A1P25705 553 aaKnown RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 IVDP26440 423 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 SERPINB3P29508 390 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 UQCRC1P31930 480 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 CEACAM8P31997 349 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 PIGAP37287 484 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ELK3P41970 407 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 CASP2P42575 452 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 DGKQP52824 942 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 TAS2R39P59534 338 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 KCNJ2P63252 427 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 MGAT5Q09328 741 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ASPHQ12797 758 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 FOXD4Q12950 439 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 DOC2AQ14183 400 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 MORF4L2Q15014 288 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 SF3B4Q15427 424 aaKnown RBP eCLIP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 TGFBIQ15582 683 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 TBCCQ15814 346 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 AP5B1Q2VPB7 878 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 C18orf21Q32NC0 220 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 FLYWCH1Q4VC44 716 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 TMEM35AQ53FP2 167 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 PAGE2BQ5JRK9 111 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 SULT1C3Q6IMI6 304 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 MAATS1Q7Z4T9 603 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 UBE3DQ7Z6J8 389 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ZC3HC1Q86WB0 502 aaKnown RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 GPSM1Q86YR5 675 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 LRRC8AQ8IWT6 810 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ULK2Q8IYT8 1036 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 LRRC25Q8N386 305 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ACOT4Q8N9L9 421 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 NEIL3Q8TAT5 605 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 SLC22A8Q8TCC7 542 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF721Q8TF20 911 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms