RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 EFCAB3Q8N7B9 438 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 OR8J2Q8NGG1 315 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 MCUR1Q96AQ8 359 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ROPN1LQ96C74 230 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 DUSP26Q9BV47 211 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 SPRTNQ9H040 489 aaPredicted RBP12.48□□□□□ -0.41
SEC13-209ENST00000397117 APMAPQ9HDC9 416 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 SLC52A3Q9NQ40 469 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ATP6V1HQ9UI12 483 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 PHF11Q9UIL8 331 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 MRPS2Q9Y399 296 aaKnown RBP12.48□□□□□ -0.41
SEC13-209ENST00000397117 SPACA6W5XKT8 324 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 MYO9AB2RTY4 2548 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 FITM1A5D6W6 292 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 GALR3O60755 368 aaPredicted RBP12.48□□□□□ -0.41
SEC13-209ENST00000397117 STK17BO94768 372 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 DLGAP3O95886 979 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 LAMP1P11279 417 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ITGAXP20702 1163 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 CPOXP36551 454 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 KLRB1Q12918 225 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 NFYCQ13952 458 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 TLR1Q15399 786 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 MUM1Q2TAK8 710 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 FAM214AQ32MH5 1076 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 C4orf17Q53FE4 359 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 C6orf10Q5SRN2 563 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ATP1A1-AS1Q5TC04 95 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ANXA8L1Q5VT79 327 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 OR4F3Q6IEY1 312 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 MRM1Q6IN84 353 aaKnown RBP12.48□□□□□ -0.41
SEC13-209ENST00000397117 TLDC1Q6P9B6 456 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 SLC2A7Q6PXP3 512 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 MSANTD1Q6ZTZ1 278 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 CAMKMTQ7Z624 323 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 RETREG3Q86VR2 466 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 DEFB107AQ8IZN7 70 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ITCHQ96J02 903 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 BHLHE41Q9C0J9 482 aaPredicted RBP12.48□□□□□ -0.41
SEC13-209ENST00000397117 WDR41Q9HAD4 459 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 IL1RL2Q9HB29 575 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 FGF21Q9NSA1 209 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 FAM120CQ9NX05 1096 aaKnown RBP12.48□□□□□ -0.41
SEC13-209ENST00000397117 TEX10Q9NXF1 929 aaPredicted RBP12.48□□□□□ -0.41
SEC13-209ENST00000397117 ASB4Q9Y574 426 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ASPDHA6ND91 283 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 CFAP73A6NFT4 308 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 ZNF860A6NHJ4 632 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 K7EM74 188 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 SGK494L7N484 410 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 KCNH1O95259 989 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 NPPAP01160 153 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 PIM1P11309 404 aaPredicted RBP12.47□□□□□ -0.41
SEC13-209ENST00000397117 TCN2P20062 427 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 F8A1P23610 371 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 TLX1P31314 330 aaPredicted RBP12.47□□□□□ -0.41
SEC13-209ENST00000397117 BUD31P41223 144 aaPredicted RBP12.47□□□□□ -0.41
SEC13-209ENST00000397117 STAT5AP42229 794 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 AVPR1BP47901 424 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 EMP3P54852 163 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 PLIN5Q00G26 463 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 PDE7AQ13946 482 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 FAM53BQ14153 422 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 MAP7Q14244 749 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 PAGE3Q5JUK9 113 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 HACD2Q6Y1H2 254 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 PRSS41Q7RTY9 318 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 TICAM1Q8IUC6 712 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 MMP21Q8N119 569 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 ARHGAP24Q8N264 748 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 DPP10Q8N608 796 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 OR9A4Q8NGU2 314 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 OR1L3Q8NH93 324 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 COQ8BQ96D53 544 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 C10orf90Q96M02 699 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 RAB3IPQ96QF0 476 aaPredicted RBP12.47□□□□□ -0.41
SEC13-209ENST00000397117 MAPKAP1Q9BPZ7 522 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 NDC1Q9BTX1 674 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 NPLQ9BXD5 320 aaPredicted RBP12.47□□□□□ -0.41
SEC13-209ENST00000397117 LYRM4Q9HD34 91 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 MS4A12Q9NXJ0 267 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 MAP10Q9P2G4 905 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 CROTQ9UKG9 612 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 EXO1Q9UQ84 846 aaKnown RBP12.47□□□□□ -0.41
SEC13-209ENST00000397117 TP53TG5Q9Y2B4 290 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 ATG4BQ9Y4P1 393 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 KCNMB2Q9Y691 235 aa12.47□□□□□ -0.41
SEC13-209ENST00000397117 A0A0A6YYC8 382 aaPredicted RBP12.46□□□□□ -0.41
SEC13-209ENST00000397117 PRSS51A0A1B0GVH4 220 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 A0A1W2PR48 441 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 C1orf226A1L170 272 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 I3L1I5 382 aaPredicted RBP12.46□□□□□ -0.41
SEC13-209ENST00000397117 GSC2O15499 205 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 PROM1O43490 865 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 NR2F6P10588 404 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 CPN2P22792 545 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 PGM1P36871 562 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 LIM2P55344 173 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 PSME3P61289 254 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 OLR1P78380 273 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms