RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 OR8D2Q9GZM6 311 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM45AQ9NWC5 275 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 BTAF1O14981 1849 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 JRKO75564 520 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 FGF3P11487 239 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CD1DP15813 335 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SYN1P17600 705 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RIDAP52758 137 aaKnown RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CLDN8P56748 225 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PSMA6P60900 246 aaKnown RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RPA4Q13156 261 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PMS2P3Q13401 168 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 TCTE1Q5JU00 501 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SLC37A3Q8NCC5 494 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CCDC106Q9BWC9 280 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF350Q9GZX5 532 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 HOXD1Q9GZZ0 328 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CCM2LQ9NUG4 571 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 LRRTM2O43300 516 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 UGDHO60701 494 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SCGB2A1O75556 95 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 GNAO1P09471 354 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 HLA-EP13747 358 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 IRF2P14316 349 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CLDN10P78369 228 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CREB5Q02930 508 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RABL3Q5HYI8 236 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 C3orf33Q6P1S2 294 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ARSKQ6UWY0 536 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RTL10Q7L3V2 364 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF584Q8IVC4 421 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 OR6N2Q8NGY6 317 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 HERPUD2Q9BSE4 406 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 MAB21L2Q9Y586 359 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 C4AP0C0L4 1744 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 TCRBV21S2A2A0A5A6 115 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF840PA6NDX5 716 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 CNTN5O94779 1100 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 KDELR2P33947 212 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 FRKP42685 505 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 GSCP56915 257 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 DCDC5Q6ZRR9 648 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 UBE2Q1Q7Z7E8 422 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RPLP0P6Q8NHW5 317 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 HUS1BQ8NHY5 278 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 LMO3Q8TAP4 145 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SLC22A8Q8TCC7 542 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ISOC1Q96CN7 298 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 VNN3Q9NY84 501 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 A0A1B0GVT2 93 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 STC2O76061 302 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF35P13682 527 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 PORP16435 677 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 THBS2P35442 1172 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 AFF1P51825 1210 aaKnown RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 RCAN2Q14206 197 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 GRK1Q15835 563 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 MEP1AQ16819 746 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 TSPYL5Q86VY4 417 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 OR51G2Q8NGK0 314 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 OR8J1Q8NGP2 316 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 FUZQ9BT04 418 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 MRI1Q9BV20 369 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SLC5A7Q9GZV3 580 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 SMG9Q9H0W8 520 aaKnown RBP5.23□□□□□ -1.57
VPS13C-204ENST00000395898 ATG5Q9H1Y0 275 aa5.23□□□□□ -1.57
VPS13C-204ENST00000395898 OR6C74A6NCV1 312 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 GPR89AB7ZAQ6 455 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 GPR89BP0CG08 455 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CELP19835 753 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 RPS15P62841 145 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ECH1Q13011 328 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 MALLQ13021 153 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SLC35F1Q5T1Q4 408 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 GTF2IRD2BQ6EKJ0 949 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 BEND4Q6ZU67 534 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 GTF2IRD2Q86UP8 949 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SLC22A16Q86VW1 577 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 MR1Q95460 341 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 TAF1P21675 1872 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CNTRLQ7Z7A1 2325 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 FTCDNL1E5RQL4 147 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 LILRB3O75022 631 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 OAZ2O95190 189 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 NTSR1P30989 418 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CASP6P55212 293 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 NXPE4Q6UWF7 544 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CTU1Q7Z7A3 348 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF280BQ86YH2 543 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 IL22RA1Q8N6P7 574 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 DENND6BQ8NEG7 585 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SCGB1C1Q8TD33 95 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 C12orf43Q96C57 262 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 FCRL3Q96P31 734 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 WDR77Q9BQA1 342 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 WDR6Q9NNW5 1121 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 RAB9BQ9NP90 201 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 DNAJC27Q9NZQ0 273 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 COPZ2Q9P299 210 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 TRBV2A0A0J9YWF9 115 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms