RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 LRFN4Q6PJG9 635 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 MILR1Q7Z6M3 343 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 FANK1Q8TC84 345 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 FERD3LQ96RJ6 166 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 CPNE7Q9UBL6 633 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 BCKDHAP12694 445 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 MAPK1P28482 360 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 EVX1P49640 407 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 AGFG1P52594 562 aaKnown RBP17.98■□□□□ 0.47
HOXC6-202ENST00000394331 RPS14P62263 151 aaKnown RBP17.98■□□□□ 0.47
HOXC6-202ENST00000394331 BBS7Q8IWZ6 715 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 OR2M2Q96R28 347 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 LHX3Q9UBR4 397 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 PCDHB9Q9Y5E1 797 aa17.98■□□□□ 0.47
HOXC6-202ENST00000394331 PRAMEF33A0A0G2JMD5 474 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 RFXANKO14593 260 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 PRAMEF10O60809 474 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 IRF1P10914 325 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 CPEP16870 476 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 HMGA1P17096 107 aaKnown RBP17.97■□□□□ 0.47
HOXC6-202ENST00000394331 ZNF7P17097 686 aaPredicted RBP17.97■□□□□ 0.47
HOXC6-202ENST00000394331 INPP1P49441 399 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 RHOAP61586 193 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 SNRPGP62308 76 aaKnown RBP17.97■□□□□ 0.47
HOXC6-202ENST00000394331 POLR2GP62487 172 aaKnown RBP eCLIP17.97■□□□□ 0.47
HOXC6-202ENST00000394331 CAP1Q01518 475 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 PTRHD1Q6GMV3 140 aaKnown RBP17.97■□□□□ 0.47
HOXC6-202ENST00000394331 FAM217AQ8IXS0 508 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 KATNB1Q9BVA0 655 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 TMEM184CQ9NVA4 438 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 FAM8A1Q9UBU6 413 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 BACE2Q9Y5Z0 518 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 GLYATL1P3A0A0U1RQE8 302 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 IQCF5A8MTL0 148 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 ISM1B1AKI9 464 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 STK25O00506 426 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 HBQ1P09105 142 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 PRPS2P11908 318 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 ZNF81P51508 661 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 LAS2Q8IYD9 372 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 SYNPOQ8N3V7 929 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 CLRN3Q8NCR9 226 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 OR2T4Q8NH00 348 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 CEP76Q8TAP6 659 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 NIPSNAP1Q9BPW8 284 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 KLF16Q9BXK1 252 aaPredicted RBP17.97■□□□□ 0.47
HOXC6-202ENST00000394331 POLR2J2Q9GZM3 115 aaKnown RBP17.97■□□□□ 0.47
HOXC6-202ENST00000394331 FTSJ1Q9UET6 329 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 ALPK3Q96L96 1907 aa17.97■□□□□ 0.47
HOXC6-202ENST00000394331 SLC22A23A1A5C7 686 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 SUV39H1O43463 412 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 CDH18Q13634 790 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 PTPRRQ15256 657 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 TAF12Q16514 161 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 C3orf38Q5JPI3 329 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 NHLRC3Q5JS37 347 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 PTCHD4Q6ZW05 846 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 TSEN54Q7Z6J9 526 aaKnown RBP17.96■□□□□ 0.47
HOXC6-202ENST00000394331 PDZD3Q86UT5 571 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 BCL7CQ8WUZ0 217 aaPredicted RBP17.96■□□□□ 0.47
HOXC6-202ENST00000394331 NELL1Q92832 810 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 ATOH1Q92858 354 aaPredicted RBP17.96■□□□□ 0.47
HOXC6-202ENST00000394331 NELL2Q99435 816 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 DOHHQ9BU89 302 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 POLMQ9NP87 494 aaPredicted RBP17.96■□□□□ 0.47
HOXC6-202ENST00000394331 FANCFQ9NPI8 374 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 AFF4Q9UHB7 1163 aaKnown RBP17.96■□□□□ 0.47
HOXC6-202ENST00000394331 ZNF451Q9Y4E5 1061 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 CASP8AP2Q9UKL3 1982 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 PRSS44E7EML9 344 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 GMDSO60547 372 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 GAAP10253 952 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 RECQLP46063 649 aaPredicted RBP17.96■□□□□ 0.47
HOXC6-202ENST00000394331 RGS4P49798 205 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 FOXD4Q12950 439 aaPredicted RBP17.96■□□□□ 0.47
HOXC6-202ENST00000394331 DSG2Q14126 1118 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 PTGES3Q15185 160 aaKnown RBP17.96■□□□□ 0.47
HOXC6-202ENST00000394331 SNAPC1Q16533 368 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 ARMC12Q5T9G4 340 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 SBSNQ6UWP8 590 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 LGI4Q8N135 537 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 IPPKQ9H8X2 491 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 RLIMQ9NVW2 624 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 ZNF222Q9UK12 451 aa17.96■□□□□ 0.47
HOXC6-202ENST00000394331 ARRDC5A6NEK1 342 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 CLIC1O00299 241 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 FFAR2O15552 330 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 SNAPC5O75971 98 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 C4BPBP20851 252 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 SP3Q02447 781 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 CAMK2DQ13557 499 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 UXS1Q8NBZ7 420 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 FAM46DQ8NEK8 389 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 NDUFAF4Q9P032 175 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 TRPS1Q9UHF7 1281 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 AP1S1P61966 158 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 GPNMBQ14956 572 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 P2RY14Q15391 338 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 NDOR1Q9UHB4 597 aa17.95■□□□□ 0.46
HOXC6-202ENST00000394331 MEIKINA0A087WXM9 373 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms