RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 BEND4Q6ZU67 534 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 PEX11GQ96HA9 241 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 PRR14Q9BWN1 585 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 SH3BP4Q9P0V3 963 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 ENTPD4Q9Y227 616 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 PCDHGA2Q9Y5H1 932 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 MEIKINA0A087WXM9 373 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 CPSF4O95639 269 aaKnown RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 HLA-DQB1P01920 261 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 ACPPP15309 386 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 STARP49675 285 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 STK19P49842 368 aaPredicted RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 AKR1C2P52895 323 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 WNT3AP56704 352 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 AKR1C1Q04828 323 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 BCL2L1Q07817 233 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 SMCO1Q147U7 214 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 C18orf21Q32NC0 220 aaPredicted RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 PLA1AQ53H76 456 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 RAET1GQ6H3X3 334 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 CRTC1Q6UUV9 634 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 OR52E4Q8NGH9 312 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 CNOT9Q92600 299 aaKnown RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 CPPED1Q9BRF8 314 aaPredicted RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 C11orf84Q9BUA3 381 aaPredicted RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 DUSP16Q9BY84 665 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 TFB2MQ9H5Q4 396 aaKnown RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 TBC1D17Q9HA65 648 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 NDUFB11Q9NX14 153 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 TRPS1Q9UHF7 1281 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 POFUT2Q9Y2G5 429 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 ARHGEF33A8MVX0 844 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 SCAMP1O15126 338 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 PIP5K1CO60331 668 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 GADD45GO95257 159 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 CXCL2P19875 107 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 KLHL26Q53HC5 615 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 IDNKQ5T6J7 187 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 MZT2AQ6P582 158 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 HGDQ93099 445 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 SERHLQ9NQF3 203 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 SNX11Q9Y5W9 270 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 EFCAB7A8K855 629 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 SGK494L7N484 410 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 BEST1O76090 585 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 SOX14O95416 240 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 NUDT7P0C024 238 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 STAG3L1P0CL83 205 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 ATP5A1P25705 553 aaKnown RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 ITGB7P26010 798 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 CCR1P32246 355 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 NDUFV1P49821 464 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 EFNA5P52803 228 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 MAXP61244 160 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 EEF1A1P68104 462 aaKnown RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 DEFA6Q01524 100 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 EEF1A2Q05639 463 aaKnown RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 ALKBH1Q13686 389 aaKnown RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 CCINQ13939 588 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 EEF1A1P5Q5VTE0 462 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 PHOSPHO1Q8TCT1 267 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 SCARB1Q8WTV0 552 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 FBXO17Q96EF6 278 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 DDIT4Q9NX09 232 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 CFAP97Q9P2B7 532 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 MBD2Q9UBB5 411 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 UBQLN1Q9UMX0 589 aaKnown RBP14.34□□□□□ -0.11
VLDLR-202ENST00000382099 IRAK3Q9Y616 596 aa14.34□□□□□ -0.11
VLDLR-202ENST00000382099 C7orf66A4D0T2 115 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 SUV39H1O43463 412 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 LGI1O95970 557 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 H2AFB2P0C5Z0 115 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 PIRTP0C851 137 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 PRSS56P0CW18 603 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 SMIM6P0DI80 62 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 MMP12P39900 470 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 PTGFRP43088 359 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 CTSCP53634 463 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 MTFR2Q6P444 385 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 LYPD4Q6UWN0 246 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 USP50Q70EL3 339 aaPredicted RBP14.33□□□□□ -0.12
VLDLR-202ENST00000382099 HSD17B13Q7Z5P4 300 aaPredicted RBP14.33□□□□□ -0.12
VLDLR-202ENST00000382099 PLEKHH3Q7Z736 793 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 DNAJB8Q8NHS0 232 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 TMEM163Q8TC26 289 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 WNT2BQ93097 391 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 KCNJ15Q99712 375 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 MAP3K3Q99759 626 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 NIFKQ9BYG3 293 aaKnown RBP14.33□□□□□ -0.12
VLDLR-202ENST00000382099 GSDMCQ9BYG8 508 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 ANKRD19PQ9H560 264 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 CNOT2Q9NZN8 540 aaKnown RBP14.33□□□□□ -0.12
VLDLR-202ENST00000382099 TMEM200CA6NKL6 621 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 H3BN98 237 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 CBSLP0DN79 551 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 HOXB6P17509 224 aaKnown RBP14.33□□□□□ -0.12
VLDLR-202ENST00000382099 CBSP35520 551 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 CASP9P55211 416 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 MELKQ14680 651 aa14.33□□□□□ -0.12
VLDLR-202ENST00000382099 TMEM132DQ14C87 1099 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms