RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 AP1G1O43747 822 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 CSF2P04141 144 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 KRT20P35900 424 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 CAV3P56539 151 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 CTBSQ01459 385 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 HENMT1Q5T8I9 393 aaKnown RBP11.11□□□□□ -0.63
DDR1-227ENST00000376570 FBXO46Q6PJ61 603 aaPredicted RBP11.11□□□□□ -0.63
DDR1-227ENST00000376570 CBARPQ8N350 705 aaPredicted RBP11.11□□□□□ -0.63
DDR1-227ENST00000376570 THAP3Q8WTV1 239 aaPredicted RBP11.11□□□□□ -0.63
DDR1-227ENST00000376570 DOHHQ9BU89 302 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 SLC17A9Q9BYT1 436 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 ERGIC3Q9Y282 383 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 PDCD11Q14690 1871 aaKnown RBP11.1□□□□□ -0.63
DDR1-227ENST00000376570 TCRBV5S2A0A599 114 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 PSMD9O00233 223 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 ADAMDEC1O15204 470 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 IDH3BO43837 385 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SERPINB7O75635 380 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 GADD45AP24522 165 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SSTR4P31391 388 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 MAGEA8P43361 318 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 TGM4P49221 684 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 HLCSP50747 726 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 DEFA1P59665 94 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 DEFA3P59666 94 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 CSNK2BP67870 215 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 MTAPQ13126 283 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 ZNF77Q15935 545 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 CPZQ66K79 652 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 USP30Q70CQ3 517 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SVOPLQ8N434 492 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SVOPQ8N4V2 548 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SMAP2Q8WU79 429 aaPredicted RBP11.1□□□□□ -0.63
DDR1-227ENST00000376570 RGMAQ96B86 450 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 ZBED6CLQ96FA7 236 aaPredicted RBP11.1□□□□□ -0.63
DDR1-227ENST00000376570 DEPDC7Q96QD5 511 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 ZNF607Q96SK3 696 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 OSBPL10Q9BXB5 764 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 PLA2G2FQ9BZM2 168 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 KLHL28Q9NXS3 571 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 COMMD3Q9UBI1 195 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 CLCA3PQ9Y6N3 262 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 MAU2Q9Y6X3 613 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 NBASA2RRP1 2371 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 ACSL1P33121 698 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 PIK3CBP42338 1070 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 XKP51811 444 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 MLIPQ5VWP3 458 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 ERICH5Q6P6B1 374 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 Q6ZNX1 250 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 B3GNT8Q7Z7M8 397 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 GALNT12Q8IXK2 581 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 RERGQ96A58 199 aaPredicted RBP11.1□□□□□ -0.63
DDR1-227ENST00000376570 TADA1Q96BN2 335 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 PDXPQ96GD0 296 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 GPR174Q9BXC1 333 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SIAEQ9HAT2 523 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 TIGARQ9NQ88 270 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 FBXL21Q9UKT6 434 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SLC27A6Q9Y2P4 619 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SPIN1Q9Y657 262 aaPredicted RBP11.1□□□□□ -0.63
DDR1-227ENST00000376570 DOCK9Q9BZ29 2069 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 TRBV4-1A0A0J9YWV2 114 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 TCRBV21S2A2A0A5A6 115 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 HTR3EA5X5Y0 456 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 AP3D1O14617 1153 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 LRRTM2O43300 516 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 MYL12AP19105 171 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 CRHBPP24387 322 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 IDUAP35475 653 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SMAD2Q15796 467 aaKnown RBP11.1□□□□□ -0.63
DDR1-227ENST00000376570 ITPRIPL2Q3MIP1 535 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 ZNF311Q5JNZ3 666 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 MPP7Q5T2T1 576 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 GRHL2Q6ISB3 625 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 LILRA6Q6PI73 481 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 SH3YL1Q96HL8 342 aaPredicted RBP11.1□□□□□ -0.63
DDR1-227ENST00000376570 RDH12Q96NR8 316 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 TMED9Q9BVK6 235 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 RDH14Q9HBH5 336 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 TM9SF3Q9HD45 589 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 HCN3Q9P1Z3 774 aa11.1□□□□□ -0.63
DDR1-227ENST00000376570 FAM171A2A8MVW0 826 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 KHNYNO15037 678 aaKnown RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 GREM1O60565 184 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 ADAM23O75077 832 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 HMGN2P05204 90 aaKnown RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 MYF5P13349 255 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 GRPRP30550 384 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 RPL4P36578 427 aaKnown RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 CD97P48960 835 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 PNCKQ6P2M8 343 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 DPPA4Q7L190 304 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 CYB561A3Q8NBI2 242 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 OR52E1Q8NGJ3 308 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 PDLIM5Q96HC4 596 aaKnown RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 RIPOR3Q96MK2 946 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 HRASLS2Q9NWW9 162 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 ERVK13-1Q9NX77 482 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 TEKT2Q9UIF3 430 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms