RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 NTSR1P30989 418 aa15.07■□□□□ 0
NUCKS1-201ENST00000367142 ARSFP54793 590 aa15.07■□□□□ 0
NUCKS1-201ENST00000367142 TMBIM6P55061 237 aa15.07■□□□□ 0
NUCKS1-201ENST00000367142 PON2Q15165 354 aa15.07■□□□□ 0
NUCKS1-201ENST00000367142 ZNF678Q5SXM1 525 aa15.07■□□□□ 0
NUCKS1-201ENST00000367142 TXNDC5Q8NBS9 432 aaKnown RBP15.07■□□□□ 0
NUCKS1-201ENST00000367142 ZNF296Q8WUU4 475 aaPredicted RBP15.07■□□□□ 0
NUCKS1-201ENST00000367142 ELAVL3Q14576 367 aaKnown RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 HMBOX1Q6NT76 420 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 TSACCQ96A04 125 aaPredicted RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 AURKBQ96GD4 344 aaPredicted RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 SLC6A7Q99884 636 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 ARHGAP39Q9C0H5 1083 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 EBF2Q9HAK2 575 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 F7P08709 466 aaPredicted RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 GTF2F2P13984 249 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 FOLR3P41439 243 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 C12orf76Q8N812 135 aaPredicted RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 OR52B2Q96RD2 323 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 EPOP01588 193 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 GNAO1P09471 354 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 POU3F4P49335 361 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 ZNF829Q3KNS6 432 aaPredicted RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 OR4K1Q8NGD4 311 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 CREB3L1Q96BA8 519 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 SLC25A44Q96H78 314 aaPredicted RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 ZNF559Q9BR84 538 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 RXFP3Q9NSD7 469 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 PPP1R14DQ9NXH3 145 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 SNU13P55769 128 aaKnown RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 RUNX3Q13761 415 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 GINS1Q14691 196 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 ZNF648Q5T619 568 aaPredicted RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 COPZ2Q9P299 210 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 CXorf49A8MYA2 514 aaPredicted RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 DIRAS1O95057 198 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 PORP16435 677 aaPredicted RBP15.06■□□□□ 0
NUCKS1-201ENST00000367142 LCN1P31025 176 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 SLC9A3P48764 834 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 RNF6Q9Y252 685 aa15.06■□□□□ 0
NUCKS1-201ENST00000367142 J3QRK9 145 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 YES1P07947 543 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 CHRNB4P30926 498 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 DSC1Q08554 894 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 TMEM107Q6UX40 140 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 BAIAP2L2Q6UXY1 529 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 ZNF517Q6ZMY9 492 aaPredicted RBP15.05■□□□□ 0
NUCKS1-201ENST00000367142 USP53Q70EK8 1073 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 NLGN4XQ8N0W4 816 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 POC1BQ8TC44 478 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 ZNF431Q8TF32 576 aaPredicted RBP15.05■□□□□ 0
NUCKS1-201ENST00000367142 ASB12Q8WXK4 309 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 PITX2Q99697 317 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 IGLON5A6NGN9 336 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 PDLIM1O00151 329 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 SEMA4FO95754 770 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 PLATP00750 562 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 CSF2RAP15509 400 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 RSU1Q15404 277 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 CST6Q15828 149 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 EPGNQ6UW88 154 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 C22orf15Q8WYQ4 148 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 GPRC5BQ9NZH0 403 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 DNAJB4Q9UDY4 337 aa15.05■□□□□ 0
NUCKS1-201ENST00000367142 TIA1P31483 386 aaKnown RBP eCLIP15.05■□□□□ -04e-7■■■■□ 20
NUCKS1-201ENST00000367142 ACTA2P62736 377 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 ACTG2P63267 376 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 RBM39Q14498 530 aaKnown RBP15.05■□□□□ -0
NUCKS1-201ENST00000367142 HOXD1Q9GZZ0 328 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 PLEKHA3Q9HB20 300 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 KIDINS220Q9ULH0 1771 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 TULP2O00295 520 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 DRD2P14416 443 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 DNAJB13P59910 316 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 CD83Q01151 205 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 SLC25A11Q02978 314 aaKnown RBP15.05■□□□□ -0
NUCKS1-201ENST00000367142 ZBED5Q49AG3 693 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 FAM205BPQ63HN1 556 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 OR4C11Q6IEV9 310 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 OR52P1PQ8NH57 321 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 PXYLP1Q8TE99 480 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 FAM46BQ96A09 425 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 RPF2Q9H7B2 306 aaKnown RBP15.05■□□□□ -0
NUCKS1-201ENST00000367142 ABRACLQ9P1F3 81 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 WRAP73Q9P2S5 460 aaPredicted RBP15.05■□□□□ -0
NUCKS1-201ENST00000367142 SARDHQ9UL12 918 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 CNOT4O95628 575 aaKnown RBP15.05■□□□□ -0
NUCKS1-201ENST00000367142 AK4P27144 223 aaPredicted RBP15.05■□□□□ -0
NUCKS1-201ENST00000367142 ACY1Q03154 408 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 NNATQ16517 81 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 SLC27A4Q6P1M0 643 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 NPY6RQ99463 290 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 LPAR4Q99677 370 aa15.05■□□□□ -0
NUCKS1-201ENST00000367142 TREX2Q9BQ50 279 aaPredicted RBP15.05■□□□□ -0
NUCKS1-201ENST00000367142 HHEXQ03014 270 aa15.04■□□□□ -0
NUCKS1-201ENST00000367142 UPP1Q16831 310 aa15.04■□□□□ -0
NUCKS1-201ENST00000367142 SHQ1Q6PI26 577 aaKnown RBP15.04■□□□□ -0
NUCKS1-201ENST00000367142 LANCL3Q6ZV70 420 aa15.04■□□□□ -0
NUCKS1-201ENST00000367142 FAM3CQ92520 227 aa15.04■□□□□ -0
NUCKS1-201ENST00000367142 ZNF689Q96CS4 500 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms