RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TAS2R38P59533 333 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 PLP2Q04941 152 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 GBX1Q14549 363 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 APIPQ96GX9 242 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 MED28Q9H204 178 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 IGSF5Q9NSI5 407 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 ACTR10Q9NZ32 417 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 SARDHQ9UL12 918 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 TBC1D24Q9ULP9 559 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 A0A1B0GVI7 797 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 HOXD9P28356 352 aaPredicted RBP17.74■□□□□ 0.43
CLIP2-202ENST00000361545 TNFRSF4P43489 277 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 CTSCP53634 463 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 FCHO2Q0JRZ9 810 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 HAVCR1Q96D42 359 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 PNCKQ6P2M8 343 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 ZNF283Q8N7M2 679 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 PTERQ96BW5 349 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 UPB1Q9UBR1 384 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 ZNF878C9JN71 531 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 RPS3P23396 243 aaKnown RBP eCLIP17.74■□□□□ 0.43
CLIP2-202ENST00000361545 CLDN8P56748 225 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 MACROD1Q9BQ69 325 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 CCDC106Q9BWC9 280 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 BTAF1O14981 1849 aa17.74■□□□□ 0.43
CLIP2-202ENST00000361545 CIB4A0PJX0 185 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 CLDN25C9JDP6 229 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 PROM1O43490 865 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 FCER2P06734 321 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 CERS1P27544 350 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 KDELR2P33947 212 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 ACADVLP49748 655 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 ABCA11PQ4W5N1 156 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 KANK2Q63ZY3 851 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 SCML4Q8N228 414 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 C7orf57Q8NEG2 295 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 NSMAFQ92636 917 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 WASH4PA8MWX3 477 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 C8BP07358 591 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 LAMP1P11279 417 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 CD6P30203 668 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 ZXDBP98169 803 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 PTCRAQ6ISU1 281 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-202ENST00000361545 SHQ1Q6PI26 577 aaKnown RBP17.73■□□□□ 0.43
CLIP2-202ENST00000361545 SHISA6Q6ZSJ9 500 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 RTL10Q7L3V2 364 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 TMIEQ8NEW7 156 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 OR8K3Q8NH51 312 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 MARCH5Q9NX47 278 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 A0A0X1KG70 313 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 ANHXE9PGG2 379 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 CCNKO75909 580 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 ETFAP13804 333 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 PITPNAQ00169 270 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 ACY1Q03154 408 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 LARP4Q71RC2 724 aaKnown RBP eCLIP17.73■□□□□ 0.43
CLIP2-202ENST00000361545 TMEM173Q86WV6 379 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-202ENST00000361545 RHBDF1Q96CC6 855 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 BARD1Q99728 777 aaKnown RBP17.73■□□□□ 0.43
CLIP2-202ENST00000361545 SMIM30A4D0T7 59 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 LINC01553A4QN01 128 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 APOL3O95236 402 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 P04436 131 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 PGCP20142 388 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 CRYZQ08257 329 aaKnown RBP17.73■□□□□ 0.43
CLIP2-202ENST00000361545 EXOC3L2Q2M3D2 409 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 SLC22A12Q96S37 553 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 PAK6Q9NQU5 681 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-202ENST00000361545 MKS1Q9NXB0 559 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 CTBP2P56545 445 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 PDZD3Q86UT5 571 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.73■□□□□ 0.43
CLIP2-202ENST00000361545 NLGN4YQ8NFZ3 816 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-202ENST00000361545 PIK3R3Q92569 461 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 SGCDQ92629 289 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 ITPAQ9BY32 194 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 MTMR10Q9NXD2 777 aa17.73■□□□□ 0.43
CLIP2-202ENST00000361545 ARSFP54793 590 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 NADSYN1Q6IA69 706 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 GRHL2Q6ISB3 625 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 PGBD2Q6P3X8 592 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 ASB18Q6ZVZ8 466 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 ZUFSPQ96AP4 578 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 ATXN7L1Q9ULK2 861 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-202ENST00000361545 POLR1CO15160 346 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-202ENST00000361545 TSPAN9O75954 239 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 ZNF432O94892 652 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 GSTT2BP0CG30 244 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 RPS3AP61247 264 aaKnown RBP17.72■□□□□ 0.43
CLIP2-202ENST00000361545 BLMHQ13867 455 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 CDKN3Q16667 212 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 FAM26DQ5JW98 314 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 PIP5K1AQ99755 562 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 EHD1Q9H4M9 534 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 EEDO75530 441 aaKnown RBP17.72■□□□□ 0.43
CLIP2-202ENST00000361545 ARL6IP5O75915 188 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 ECHS1P30084 290 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 UGT3A2Q3SY77 523 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 SPATS1Q496A3 300 aa17.72■□□□□ 0.43
CLIP2-202ENST00000361545 BLOC1S3Q6QNY0 202 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms