RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SLC9A3P48764 834 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 CNTN1Q12860 1018 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 HYAL2Q12891 473 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 KLHL22Q53GT1 634 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 DDI2Q5TDH0 399 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 PGBD2Q6P3X8 592 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 TMEM220Q6QAJ8 160 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 TMC8Q8IU68 726 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 GALNT12Q8IXK2 581 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 LRRC56Q8IYG6 542 aaPredicted RBP16.82■□□□□ 0.28
RTN4-204ENST00000357732 VANGL1Q8TAA9 524 aaPredicted RBP16.82■□□□□ 0.28
RTN4-204ENST00000357732 PXYLP1Q8TE99 480 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 ZNF689Q96CS4 500 aaPredicted RBP16.82■□□□□ 0.28
RTN4-204ENST00000357732 TXNL4BQ9NX01 149 aaKnown RBP16.82■□□□□ 0.28
RTN4-204ENST00000357732 PI15O43692 258 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 GBAP04062 536 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 ACADMP11310 421 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 CKMT1AP12532 417 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 TIMP2P16035 220 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 DUSP6Q16828 381 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 TBRG1Q3YBR2 411 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 C3orf38Q5JPI3 329 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 ZNF648Q5T619 568 aaPredicted RBP16.82■□□□□ 0.28
RTN4-204ENST00000357732 CCDC149Q6ZUS6 474 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 KRT78Q8N1N4 520 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 GPR32P1Q8NGA4 272 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 TRIM63Q969Q1 353 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 SLC6A18Q96N87 628 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 TMEM98Q9Y2Y6 226 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 HELZP42694 1942 aaKnown RBP16.81■□□□□ 0.28
RTN4-204ENST00000357732 A0A1W2PRQ8 180 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 SNTNA6NMZ2 147 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 PDHA2P29803 388 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 TAP2Q03519 686 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 SEC23BQ15437 767 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 LEXMQ3ZCV2 418 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 SLC35F1Q5T1Q4 408 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 PDZK1Q5T2W1 519 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 FAM131AQ6UXB0 335 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 SLC9B2Q86UD5 537 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 GATAD2AQ86YP4 633 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 LILRA3Q8N6C8 439 aaPredicted RBP16.81■□□□□ 0.28
RTN4-204ENST00000357732 PSD4Q8NDX1 1056 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 SLC7A6Q92536 515 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 FOXJ1Q92949 421 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 TMEM19Q96HH6 336 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 GDF15Q99988 308 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 NDEL1Q9GZM8 345 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 TESQ9UGI8 421 aaKnown RBP16.81■□□□□ 0.28
RTN4-204ENST00000357732 LEFTY1O75610 366 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 BCHEP06276 602 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 XPAP23025 273 aaPredicted RBP16.81■□□□□ 0.28
RTN4-204ENST00000357732 CXCR2P25025 360 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 PTBP1P26599 531 aaKnown RBP eCLIP16.81■□□□□ 0.281e-7■■■■□ 26.1
RTN4-204ENST00000357732 TMIGD1Q6UXZ0 262 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 HORMAD2Q8N7B1 307 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 AP2M1Q96CW1 435 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 TRMT61AQ96FX7 289 aaKnown RBP16.81■□□□□ 0.28
RTN4-204ENST00000357732 KCTD7Q96MP8 289 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 NELL2Q99435 816 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 TRAF4Q9BUZ4 470 aaPredicted RBP16.81■□□□□ 0.28
RTN4-204ENST00000357732 RMI1Q9H9A7 625 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 TRPV5Q9NQA5 729 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 KLHL20Q9Y2M5 609 aa16.81■□□□□ 0.28
RTN4-204ENST00000357732 TMEM129A0AVI4 362 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 FABP12A6NFH5 140 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 HEPACAM2A8MVW5 462 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 CDRT1O95170 752 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 GAAP10253 952 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 HLA-DMAP28067 261 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 FRKP42685 505 aaPredicted RBP16.8■□□□□ 0.28
RTN4-204ENST00000357732 PRSS53Q2L4Q9 553 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 PLK5Q496M5 336 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 ZNF805Q5CZA5 627 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 ASTLQ6HA08 431 aaPredicted RBP16.8■□□□□ 0.28
RTN4-204ENST00000357732 USP30Q70CQ3 517 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 LIX1LQ8IVB5 337 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 TCEANCQ8N8B7 351 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 MYLIPQ8WY64 445 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 RIPOR3Q96MK2 946 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 SEMA3GQ9NS98 782 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 C17orf113A0A1B0GUU1 675 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 SAP18O00422 153 aaKnown RBP16.8■□□□□ 0.28
RTN4-204ENST00000357732 TEX28O15482 410 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 HCN1O60741 890 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 CYP7B1O75881 506 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 HLA-DQB1P01920 261 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 NR2F6P10588 404 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 MYL12AP19105 171 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 MMP12P39900 470 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 TRIM60Q495X7 471 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 GPAT3Q53EU6 434 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 ZMAT1Q5H9K5 638 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 LIPKQ5VXJ0 399 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 TIGD3Q6B0B8 471 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 METAP1DQ6UB28 335 aaPredicted RBP16.8■□□□□ 0.28
RTN4-204ENST00000357732 LCTLQ6UWM7 567 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 ZC3HAV1LQ96H79 300 aaKnown RBP16.8■□□□□ 0.28
RTN4-204ENST00000357732 ZNF514Q96K75 400 aaPredicted RBP16.8■□□□□ 0.28
RTN4-204ENST00000357732 FRMD6Q96NE9 622 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms