RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ZNF37AP17032 561 aaPredicted RBP14.53□□□□□ -0.08
DDX55-202ENST00000354291 GDF1P27539 372 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 PTH2RP49190 550 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 PGGT1BP53609 377 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 NR1H2P55055 460 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 CRYZQ08257 329 aaKnown RBP14.53□□□□□ -0.08
DDX55-202ENST00000354291 DMTNQ08495 405 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 PIGGQ5H8A4 983 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 ZC3HC1Q86WB0 502 aaKnown RBP14.53□□□□□ -0.08
DDX55-202ENST00000354291 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.53□□□□□ -0.08
DDX55-202ENST00000354291 ANKRD53Q8N9V6 530 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 MAPK1IP1LQ8NDC0 245 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 TRPV3Q8NET8 790 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 PPP1R14CQ8TAE6 165 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 PIK3IP1Q96FE7 263 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 VPS39Q96JC1 886 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 OR4K3Q96R72 315 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 QPCTLQ9NXS2 382 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 PSAT1Q9Y617 370 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 FREM3P0C091 2139 aa14.53□□□□□ -0.08
DDX55-202ENST00000354291 ROS1P08922 2347 aa14.52□□□□□ -0.08
DDX55-202ENST00000354291 FAM95CA0A1B0GW59 222 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 CD8B2A6NJW9 211 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 TP73O15350 636 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 LRATO95237 230 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 ACSL3O95573 720 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 CDKL1Q00532 357 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 KRTAP1-1Q07627 177 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 FOXF2Q12947 444 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 PPP1R3AQ16821 1122 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 ZNF791Q3KP31 576 aaPredicted RBP14.52□□□□□ -0.09
DDX55-202ENST00000354291 HEPHL1Q6MZM0 1159 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 ADGRD1Q6QNK2 874 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 SBSNQ6UWP8 590 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 C9orf106Q8NAJ2 232 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 OR14A16Q8NHC5 309 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 SLC5A11Q8WWX8 675 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 NEIL2Q969S2 332 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 TSNARE1Q96NA8 513 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 KRT12Q99456 494 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 ALOXE3Q9BYJ1 711 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 GSX2Q9BZM3 304 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 PROK2Q9HC23 129 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 MRPS33Q9Y291 106 aaKnown RBP14.52□□□□□ -0.09
DDX55-202ENST00000354291 SNX24Q9Y343 169 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 SLC6A5Q9Y345 797 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 DYRK1BQ9Y463 629 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 KCNE2Q9Y6J6 123 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 ANK2Q01484 3957 aa14.52□□□□□ -0.09
DDX55-202ENST00000354291 DSCAMO60469 2012 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 MBD3L3A6NE82 208 aaPredicted RBP14.51□□□□□ -0.09
DDX55-202ENST00000354291 C17orf105B2RV13 164 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 PHF1O43189 567 aaPredicted RBP14.51□□□□□ -0.09
DDX55-202ENST00000354291 RPL21P46778 160 aaKnown RBP14.51□□□□□ -0.09
DDX55-202ENST00000354291 HNMTP50135 292 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 RAB38P57729 211 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 STX4Q12846 297 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 CALCOCO2Q13137 446 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 TNK1Q13470 666 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 FASTKD3Q14CZ7 662 aaKnown RBP14.51□□□□□ -0.09
DDX55-202ENST00000354291 THOC6Q86W42 341 aaKnown RBP14.51□□□□□ -0.09
DDX55-202ENST00000354291 ZNF595Q8IYB9 648 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 ZBED8Q8IZ13 594 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 FAM13CQ8NE31 585 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 OR8K3Q8NH51 312 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 MBD3L2Q8NHZ7 208 aaPredicted RBP14.51□□□□□ -0.09
DDX55-202ENST00000354291 SLC2A12Q8TD20 617 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 PAQR8Q8TEZ7 354 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 PYROXD1Q8WU10 500 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 AIF1LQ9BQI0 150 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 DOHHQ9BU89 302 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 PRDM14Q9GZV8 571 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 AICDAQ9GZX7 198 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 RHOJQ9H4E5 214 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 CALHM2Q9HA72 323 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 PELI2Q9HAT8 420 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 POPDC3Q9HBV1 291 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 SH2D2AQ9NP31 389 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 ABCA1O95477 2261 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 NCKAP5O14513 1909 aa14.51□□□□□ -0.09
DDX55-202ENST00000354291 CDC7O00311 574 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 SIAH2O43255 324 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 CTIFO43310 598 aaKnown RBP14.5□□□□□ -0.09
DDX55-202ENST00000354291 C1QAP02745 245 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 TP53P04637 393 aaPredicted RBP14.5□□□□□ -0.09
DDX55-202ENST00000354291 SERPINA6P08185 405 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 SLC12A2P55011 1212 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 TAS2R39P59534 338 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 MPEG1Q2M385 716 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 NXPE4Q6UWF7 544 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 C20orf204Q6ZNR8 217 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 ADAMTSL2Q86TH1 951 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 EGFL8Q99944 293 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 ERP44Q9BS26 406 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 NPLQ9BXD5 320 aaPredicted RBP14.5□□□□□ -0.09
DDX55-202ENST00000354291 KLHL28Q9NXS3 571 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 WHRNQ9P202 907 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 CTNNAL1Q9UBT7 734 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 VTI1BQ9UEU0 232 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 IKZF3Q9UKT9 509 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms