RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 PGDP52209 483 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 KCNJ10P78508 379 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 RGS1Q08116 209 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 MAD2L1BPQ15013 274 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 MPEG1Q2M385 716 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 MINDY4Q4G0A6 757 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 TMEM196Q5HYL7 178 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 NDUFAF5Q5TEU4 345 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 TYW3Q6IPR3 259 aaKnown RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 SYCE2Q6PIF2 218 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 CHRDL2Q6WN34 429 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 PDZD3Q86UT5 571 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 RBM45Q8IUH3 476 aaKnown RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 KLHDC8AQ8IYD2 350 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 SLC35G5Q96KT7 338 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 ART5Q96L15 291 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 COPS4Q9BT78 406 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 SPHK1Q9NYA1 384 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 THAP10Q9P2Z0 257 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 PMF1-BGLAPU3KQ54 211 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 HEATR5BQ9P2D3 2071 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 KRBA1A5PL33 1030 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 GRXCR2A6NFK2 248 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 ADH1BP00325 375 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 HOXB9P17482 250 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 GPX2P18283 190 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 FPR1P21462 350 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 CTHP32929 405 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 RAB28P51157 221 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 SLC35A2P78381 396 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 LSM11P83369 360 aaKnown RBP eCLIP9.88□□□□□ -0.836e-6■□□□□ 10.9
SMPD4-201ENST00000351288 KHDRBS2Q5VWX1 349 aaKnown RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 ERICH5Q6P6B1 374 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 TSEN54Q7Z6J9 526 aaKnown RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 SFTPA2Q8IWL1 248 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 RAB7BQ96AH8 199 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 COX4I2Q96KJ9 171 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 COQ10AQ96MF6 247 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 C8orf4Q9NR00 106 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 RNF6Q9Y252 685 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 TPRKBQ9Y3C4 175 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 FUOMA2VDF0 154 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 CAPN5O15484 640 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 LCMT2O60294 686 aaKnown RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 B4GALT2O60909 372 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 TGM3Q08188 693 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 HYAL1Q12794 435 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 TARDBPQ13148 414 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 DUSP7Q16829 419 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 RGS21Q2M5E4 152 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 COLEC12Q5KU26 742 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 KIAA1614Q5VZ46 1190 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 DHRS4L2Q6PKH6 230 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 CASP12Q6UXS9 341 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 FAM43BQ6ZT52 329 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 PTCHD4Q6ZW05 846 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 CBLL1Q75N03 491 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 C6orf120Q7Z4R8 191 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 SERPINA11Q86U17 422 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 SETD9Q8NE22 299 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 APH1BQ8WW43 257 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 TAMM41Q96BW9 452 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 AHCYL2Q96HN2 611 aaKnown RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 SPACA7Q96KW9 195 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 WFDC6Q9BQY6 131 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 CHCHD6Q9BRQ6 235 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 CNPPD1Q9BV87 410 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 DZANK1Q9NVP4 752 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 FAIMQ9NVQ4 179 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 CHCHD3Q9NX63 227 aaKnown RBP9.88□□□□□ -0.83
SMPD4-201ENST00000351288 USE1Q9NZ43 259 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 MAT2BQ9NZL9 334 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 NDUFAF4Q9P032 175 aa9.88□□□□□ -0.83
SMPD4-201ENST00000351288 NPC1O15118 1278 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 ATP6V1G1O75348 118 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 TCEA1P23193 301 aaKnown RBP9.87□□□□□ -0.83
SMPD4-201ENST00000351288 GRK5P34947 590 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 SMARCD3Q6STE5 483 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 AMIGO1Q86WK6 493 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 ARMC8Q8IUR7 673 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 GPR65Q8IYL9 337 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMPD4-201ENST00000351288 C7orf34Q96L11 122 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 CEP19Q96LK0 163 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 YTHDF1Q9BYJ9 559 aaKnown RBP9.87□□□□□ -0.83
SMPD4-201ENST00000351288 ZNF576Q9H609 170 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 ACOT13Q9NPJ3 140 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 TOR4AQ9NXH8 423 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 CD207Q9UJ71 328 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 MKLN1Q9UL63 735 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 PCDHGA6Q9Y5G7 932 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 RTTNQ86VV8 2226 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 BMP4P12644 408 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 PPIBP23284 216 aaKnown RBP9.87□□□□□ -0.83
SMPD4-201ENST00000351288 DRD3P35462 400 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 ST13P50502 369 aaKnown RBP9.87□□□□□ -0.83
SMPD4-201ENST00000351288 EPHA5P54756 1037 aa9.87□□□□□ -0.83
SMPD4-201ENST00000351288 VSX2P58304 361 aaPredicted RBP9.87□□□□□ -0.83
SMPD4-201ENST00000351288 KCNC3Q14003 757 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms