RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.02□□□□□ -0.81e-8■■■■■ 37.3
SMG7-201ENST00000347615 PPIL3Q9H2H8 161 aaKnown RBP10.02□□□□□ -0.8
SMG7-201ENST00000347615 NKX3-2P78367 333 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 ST3GAL3Q11203 375 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 CHAF1BQ13112 559 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 TAZQ16635 292 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 ZNF181Q2M3W8 571 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 CYP4V2Q6ZWL3 525 aaPredicted RBP10.02□□□□□ -0.81
SMG7-201ENST00000347615 KCTD9Q7L273 389 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 COMMD6Q7Z4G1 85 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 CLEC14AQ86T13 490 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 CD180Q99467 661 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 MGME1Q9BQP7 344 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 NECTIN3Q9NQS3 549 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 HCFC1R1Q9NWW0 138 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 ERVK-11Q9UQG0 969 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 PCDH17O14917 1159 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 PPP5CP53041 499 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 IL20RBQ6UXL0 311 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 ZNF367Q7RTV3 350 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 JAGN1Q8N5M9 183 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 SRFBP1Q8NEF9 429 aaKnown RBP10.02□□□□□ -0.81
SMG7-201ENST00000347615 GLYATL1Q969I3 302 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 ZNF717Q9BY31 904 aaPredicted RBP10.02□□□□□ -0.81
SMG7-201ENST00000347615 COMMD4Q9H0A8 199 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 PRELID1Q9Y255 219 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 WDR45Q9Y484 360 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 CA12O43570 354 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 CAPN15O75808 1086 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 FGF18O76093 207 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 ATXN1LP0C7T5 689 aaKnown RBP10.02□□□□□ -0.81
SMG7-201ENST00000347615 C1GALT1C1LP0DN25 315 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 UQCRC2P22695 453 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 HOXD12P35452 270 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 ADAM8P78325 824 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 DEFB134Q4QY38 66 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 BCL2L15Q5TBC7 163 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 KCTD11Q693B1 232 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 CYB561A3Q8NBI2 242 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 CASTOR1Q8WTX7 329 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 TRIM36Q9NQ86 728 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 IFT46Q9NQC8 304 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.02□□□□□ -0.818e-7■■■□□ 15.1
SMG7-201ENST00000347615 DCAF13Q9NV06 445 aaKnown RBP10.02□□□□□ -0.81
SMG7-201ENST00000347615 FBXL12Q9NXK8 326 aa10.02□□□□□ -0.81
SMG7-201ENST00000347615 DNAJC25-GNG10A0A024R161 153 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 GABRR3A8MPY1 467 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 ENTPD6O75354 484 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 RPS17P08708 135 aaKnown RBP10.01□□□□□ -0.81
SMG7-201ENST00000347615 GDI1P31150 447 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 PYCR1P32322 319 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 DSG2Q14126 1118 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 KLHL26Q53HC5 615 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 TPGS2Q68CL5 300 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 PLBD1Q6P4A8 553 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 ELMOD2Q8IZ81 293 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 PAPD5Q8NDF8 572 aaKnown RBP10.01□□□□□ -0.81
SMG7-201ENST00000347615 ARRDC2Q8TBH0 407 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 IGSF21Q96ID5 467 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 FNIP2Q9P278 1114 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 MRPS33Q9Y291 106 aaKnown RBP10.01□□□□□ -0.81
SMG7-201ENST00000347615 RWDD3Q9Y3V2 267 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 RBM7Q9Y580 266 aaKnown RBP10.01□□□□□ -0.81
SMG7-201ENST00000347615 CSNK1G3Q9Y6M4 447 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 CLCA1A8K7I4 914 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 VAMP1P23763 118 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 IL12BP29460 328 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 ADRA1AP35348 466 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 LRIT3Q3SXY7 679 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 LIPJQ5W064 366 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 ATCAYQ86WG3 371 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 C7orf61Q8IZ16 206 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 FATE1Q969F0 183 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 NEIL2Q969S2 332 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 AKAP7Q9P0M2 348 aaPredicted RBP10.01□□□□□ -0.81
SMG7-201ENST00000347615 SOCS7O14512 581 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 OAZ2O95190 189 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 SCGB1D2O95969 90 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 FGF4P08620 206 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 PGAM2P15259 253 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 BMP8BP34820 402 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 CLCN7P51798 805 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 ILF3Q12906 894 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMG7-201ENST00000347615 SOWAHCQ53LP3 525 aaPredicted RBP10.01□□□□□ -0.81
SMG7-201ENST00000347615 NADSYN1Q6IA69 706 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 BMP8AQ7Z5Y6 402 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 OR5AR1Q8NGP9 310 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 CEP76Q8TAP6 659 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 C16orf78Q8WTQ4 265 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 LGR4Q9BXB1 951 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 HPF1Q9NWY4 346 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 CALML5Q9NZT1 146 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 H0YJX3 145 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 UPK1BO75841 260 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 IL7P13232 177 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 HK3P52790 923 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 PTGES3Q15185 160 aaKnown RBP10.01□□□□□ -0.81
SMG7-201ENST00000347615 TBC1D15Q8TC07 691 aa10.01□□□□□ -0.81
SMG7-201ENST00000347615 CNDP2Q96KP4 475 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms