RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 REEP3Q6NUK4 255 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 OR4K15Q8NH41 348 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 OR51Q1Q8NH59 317 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 PSD2Q9BQI7 771 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 GPR160Q9UJ42 338 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 POMPQ9Y244 141 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 BMP4P12644 408 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 SNTB2Q13425 540 aaKnown RBP16.97■□□□□ 0.31
SMAD4-201ENST00000342988 PDGFRLQ15198 375 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 CST9LP1Q5W188 147 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 STEAP4Q687X5 459 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 TANGO2Q6ICL3 276 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 OTOP1Q7RTM1 612 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 OR9K2Q8NGE7 335 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 CNN2Q99439 309 aaKnown RBP16.97■□□□□ 0.31
SMAD4-201ENST00000342988 MPDZO75970 2070 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 A0A0D9SG52 128 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 MAGEB4O15481 346 aaPredicted RBP16.97■□□□□ 0.31
SMAD4-201ENST00000342988 RAB11AP62491 216 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 PIGZQ86VD9 579 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 COQ10AQ96MF6 247 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 H0Y8G0 127 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 IMPA2O14732 288 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 KNG1P01042 644 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 CLEC3BP05452 202 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 TIGD5Q53EQ6 642 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 CFAP77Q6ZQR2 320 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 CD163Q86VB7 1156 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 OR4K1Q8NGD4 311 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 KLHL42Q9P2K6 505 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 ANKRD31Q8N7Z5 1873 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 RHOQP17081 205 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 NDUFA6P56556 154 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 GK3PQ14409 553 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 PON2Q15165 354 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 GPC2Q8N158 579 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 OR6N2Q8NGY6 317 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 RADILQ96JH8 1075 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 BEX2Q9BXY8 128 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 REEP4Q9H6H4 257 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 BEX1Q9HBH7 125 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 PRKCIP41743 596 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 PPP4CP60510 307 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 FAM74A1Q5RGS3 127 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 CLVS2Q5SYC1 327 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 ZNF705AQ6ZN79 300 aaPredicted RBP16.96■□□□□ 0.31
SMAD4-201ENST00000342988 ZNF781Q8N8C0 355 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 NFKBIEO00221 500 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 FSTL4Q6MZW2 842 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 NRROSQ86YC3 692 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 TMEM126BQ8IUX1 230 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 ZFR2Q9UPR6 939 aaKnown RBP16.96■□□□□ 0.31
SMAD4-201ENST00000342988 GOT2P00505 430 aaKnown RBP16.96■□□□□ 0.31
SMAD4-201ENST00000342988 ADIPOR1Q96A54 375 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 FETUBQ9UGM5 382 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 TFP02787 698 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 CRYBB1P53674 252 aaPredicted RBP16.96■□□□□ 0.31
SMAD4-201ENST00000342988 SETD7Q8WTS6 366 aaKnown RBP16.96■□□□□ 0.31
SMAD4-201ENST00000342988 PDCD1LG2Q9BQ51 273 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 TRBC2A0A5B9 178 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 CH25HO95992 272 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 GRIN2CQ14957 1233 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 SGCAQ16586 387 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 C9orf57Q5W0N0 161 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 SLC27A4Q6P1M0 643 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 HORMAD2Q8N7B1 307 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 WDR26Q9H7D7 661 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.31
SMAD4-201ENST00000342988 ATG9BQ674R7 924 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 RBM23Q86U06 439 aaKnown RBP16.96■□□□□ 0.3
SMAD4-201ENST00000342988 BOLLQ8N9W6 283 aaKnown RBP16.96■□□□□ 0.3
SMAD4-201ENST00000342988 POT1Q9NUX5 634 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 CCDC85CA6NKD9 419 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 SLC31A1O15431 190 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 EPHA10Q5JZY3 1008 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 FAM182BQ5T319 152 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 OR6T1Q8NGN1 323 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 CCDC74AQ96AQ1 378 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 CCDC74BQ96LY2 380 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 PATZ1Q9HBE1 687 aaKnown RBP16.96■□□□□ 0.3
SMAD4-201ENST00000342988 KLHL9Q9P2J3 617 aa16.96■□□□□ 0.3
SMAD4-201ENST00000342988 SETD1AO15047 1707 aaKnown RBP16.95■□□□□ 0.3
SMAD4-201ENST00000342988 IGFBP1P08833 259 aaPredicted RBP16.95■□□□□ 0.3
SMAD4-201ENST00000342988 ERVK-25P63136 954 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 NLRP8Q86W28 1048 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 BAGE3Q86Y29 109 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 BAGE2Q86Y30 109 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 CHCHD4Q8N4Q1 142 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 TBC1D20Q96BZ9 403 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 CERS4Q9HA82 394 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 FAM120CQ9NX05 1096 aaKnown RBP16.95■□□□□ 0.3
SMAD4-201ENST00000342988 RALGAPA1Q6GYQ0 2036 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 A0A1W2PQH9 124 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 ADGRD1Q6QNK2 874 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 CEACAM19Q7Z692 300 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 ZNF440Q8IYI8 595 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 OR10T2Q8NGX3 314 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 ZNRF4Q8WWF5 429 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 DPCDQ9BVM2 203 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms