RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 NEIL3Q8TAT5 605 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 POM121Q96HA1 1249 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 FBXL20Q96IG2 436 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 CPNE1Q99829 537 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 TMEM79Q9BSE2 394 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 CNPPD1Q9BV87 410 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 WDR41Q9HAD4 459 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 SEMA4BQ9NPR2 832 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-202ENST00000338995 RASSF1Q9NS23 344 aa13.1□□□□□ -0.31
COMMD4-202ENST00000338995 ZNF629Q9UEG4 869 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-202ENST00000338995 MTO1Q9Y2Z2 717 aaKnown RBP13.1□□□□□ -0.31
COMMD4-202ENST00000338995 EML6Q6ZMW3 1958 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 OR6C76A6NM76 312 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 E7ESA3 106 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 CCDC188H7C350 402 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 RTCAO00442 366 aaKnown RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 FAM155BO75949 473 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 SCELO95171 688 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 EPPINO95925 133 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 FOSL1P15407 271 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 ALOX15P16050 662 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 ASCL1P50553 236 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 ARFIP1P53367 373 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 RPP38P78345 283 aaKnown RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 IGLV3-21P80748 117 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 KHDRBS2Q5VWX1 349 aaKnown RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 HLA-DQA1Q5Y7H0 255 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 ZNF793Q6ZN11 406 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 RNF111Q6ZNA4 994 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 OR4N5Q8IXE1 308 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 LAS2Q8IYD9 372 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 ULK2Q8IYT8 1036 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 ST13P4Q8IZP2 240 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 LRRC25Q8N386 305 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 OR7G3Q8NG95 312 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 NRGNQ92686 78 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 RIT1Q92963 219 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 RNASE6Q93091 150 aaKnown RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 PPWD1Q96BP3 646 aaKnown RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 GPATCH1Q9BRR8 931 aaKnown RBP13.09□□□□□ -0.31
COMMD4-202ENST00000338995 DOHHQ9BU89 302 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 TRIM31Q9BZY9 425 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 NMRAL1Q9HBL8 299 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 OPTCQ9UBM4 332 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 ANGPTL3Q9Y5C1 460 aa13.09□□□□□ -0.31
COMMD4-202ENST00000338995 NAV3Q8IVL0 2385 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 C15orf38-AP3S2A0A0A6YYH1 394 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 ANKRD33BA6NCL7 494 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 PHGDHO43175 533 aaKnown RBP13.08□□□□□ -0.32
COMMD4-202ENST00000338995 FGF17O60258 216 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 ZNF354AO60765 605 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-202ENST00000338995 PRAMEF4O60810 478 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 SH3BGRLO75368 114 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 TRAPPC6AO75865 159 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 SNX4O95219 450 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 C1QAP02745 245 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 IGKV3-11P04433 115 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 EPB42P16452 691 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 CD22P20273 847 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 BMP5P22003 454 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 PTX3P26022 381 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-202ENST00000338995 GDF1P27539 372 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 SPRP35270 261 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-202ENST00000338995 TIMP3P35625 211 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 GP5P40197 560 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 PIK3CBP42338 1070 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 RAB10P61026 200 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 ZNF267Q14586 743 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-202ENST00000338995 OR4D1Q15615 310 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 CEBPEQ15744 281 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 FLYWCH1Q4VC44 716 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 FBXO48Q5FWF7 155 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 PRAMEF20Q5VT98 475 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 PRAMEF9Q5VWM5 478 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 ADNP2Q6IQ32 1131 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 CAPN12Q6ZSI9 719 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 RAPH1Q70E73 1250 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 CYS1Q717R9 158 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 PACS2Q86VP3 889 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 C9orf40Q8IXQ3 194 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 REPS1Q96D71 796 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 GAL3ST4Q96RP7 486 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 WDR83Q9BRX9 315 aaKnown RBP13.08□□□□□ -0.32
COMMD4-202ENST00000338995 ZNF703Q9H7S9 590 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-202ENST00000338995 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 SH2D2AQ9NP31 389 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 NUDT4Q9NZJ9 180 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 SPRR3Q9UBC9 169 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 PCDHGA11Q9Y5H2 935 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 NINQ8N4C6 2090 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 ZFHX3Q15911 3703 aa13.08□□□□□ -0.32
COMMD4-202ENST00000338995 C2orf92A0A1B0GVN3 265 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 TUBAL3A6NHL2 446 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 A6NNC1 897 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 K7EPI3 171 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 SAP18O00422 153 aaKnown RBP13.07□□□□□ -0.32
COMMD4-202ENST00000338995 CDH16O75309 829 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 GPR75O95800 540 aa13.07□□□□□ -0.32
COMMD4-202ENST00000338995 FBXO45P0C2W1 286 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms