RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 PCDHGA3Q9Y5H0 932 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 PLXNB3Q9ULL4 1909 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SNTNA6NMZ2 147 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SOD1P00441 154 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 OR12D1P0DN82 309 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 EPCAMP16422 314 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 GABRB1P18505 474 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CD72P21854 359 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 ACADLP28330 430 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 BUD31P41223 144 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CLCNKAP51800 687 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CRISP3P54108 245 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 PUM1Q14671 1186 aaKnown RBP eCLIP11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 BHLHB9Q6PI77 547 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 FAM83FQ8NEG4 500 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TM4SF18Q96CE8 201 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 ZFYVE19Q96K21 471 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 FERD3LQ96RJ6 166 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 PELI2Q9HAT8 420 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CUEDC1Q9NWM3 386 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 HAT1O14929 419 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 DSCR3O14972 297 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 NDUFS4O43181 175 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TLX2O43763 284 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 LILRB5O75023 590 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 EPHX1P07099 455 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SLC15A1P46059 708 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 LIM2P55344 173 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 DPTQ07507 201 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 ILKQ13418 452 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 ARHGAP19Q14CB8 494 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 MEDAGQ5VYS4 303 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SAXO2Q658L1 398 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 NXPE3Q969Y0 559 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TRNT1Q96Q11 434 aaKnown RBP11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 MS4A8Q9BY19 250 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 ABCG4Q9H172 646 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 OR52A5Q9H2C5 316 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SNTG1Q9NSN8 517 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 FTSJ1Q9UET6 329 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SLC6A14Q9UN76 642 aa11.11□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 MFN2O95140 757 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 VIPR2P41587 438 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CDC20Q12834 499 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 PIN1Q13526 163 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 GNA13Q14344 377 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 NCF4Q15080 339 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TCTN3Q6NUS6 607 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CCBE1Q6UXH8 406 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 C11orf74Q86VG3 221 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 FAM129CQ86XR2 697 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 FLCNQ8NFG4 579 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 VWCEQ96DN2 955 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TREX2Q9BQ50 279 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 C17orf62Q9BQA9 187 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 BTBD2Q9BX70 525 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TSSK6Q9BXA6 273 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 DPP7Q9UHL4 492 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 IRAK3Q9Y616 596 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 NINQ8N4C6 2090 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TMEM221A6NGB7 291 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 PRRT4C9JH25 899 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SOX3P41225 446 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 RORCP51449 518 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 GPAT3Q53EU6 434 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TMPRSS11AQ6ZMR5 421 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 USP30Q70CQ3 517 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 C12orf40Q86WS4 652 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TBC1D19Q8N5T2 526 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CACYBPQ9HB71 228 aaKnown RBP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CTPS2Q9NRF8 586 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 INIPQ9NRY2 104 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 IMP3Q9NV31 184 aaKnown RBP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SEC14L4Q9UDX3 406 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 LINC00854A0A1B0GVQ3 168 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CTDSP2O14595 271 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CYP7B1O75881 506 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TSPAN19P0C672 248 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CISD3P0C7P0 127 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 PSMB5P28074 263 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 NCBP2P52298 156 aaKnown RBP eCLIP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SNAPC1Q16533 368 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 C9orf64Q5T6V5 341 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 RSBN1Q5VWQ0 802 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 RTL10Q7L3V2 364 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 LRRC56Q8IYG6 542 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 OR5K2Q8NHB8 316 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 TEX12Q9BXU0 123 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 OR51I1Q9H343 314 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 ENTPD4Q9Y227 616 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 PCM1Q15154 2024 aa11.1□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 PAPLNO95428 1278 aa11.09□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SCG5P05408 212 aa11.09□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 NR2F6P10588 404 aa11.09□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 PIPP12273 146 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 SLC6A11P48066 632 aa11.09□□□□□ -0.63
CSPG4P4Y-201ENST00000333235 RHAGQ02094 409 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms