RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ANXA8L1Q5VT79 327 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 NCEH1Q6PIU2 408 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ZNF467Q7Z7K2 595 aaPredicted RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ADGRF3Q8IZF5 1079 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 CELF5Q8N6W0 485 aaKnown RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 VPS37AQ8NEZ2 397 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 OR6C4Q8NGE1 309 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 SUSD3Q96L08 255 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 TMEM38AQ9H6F2 299 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 C1GALT1Q9NS00 363 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 EXO1Q9UQ84 846 aaKnown RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 SLC22A14Q9Y267 594 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 GSTK1Q9Y2Q3 226 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 PCDHB9Q9Y5E1 797 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ZFP37Q9Y6Q3 630 aaPredicted RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 PLXNB3Q9ULL4 1909 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 SHISA3A0PJX4 238 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 KHNYNO15037 678 aaKnown RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 SMAD6O43541 496 aaKnown RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 LANCL1O43813 399 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 PRKYO43930 277 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 FZD6O60353 706 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 SOD1P00441 154 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 CFDP00746 253 aaPredicted RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 CXCL3P19876 107 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ITPKAP23677 461 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 STOMP27105 288 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 BTCP35070 178 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 GBX2P52951 348 aaPredicted RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ATP12AP54707 1039 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 PCBP3P57721 371 aaKnown RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 HBA1P69905 142 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 CDK6Q00534 326 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 RING1Q06587 406 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ACSM2AQ08AH3 577 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 TWF1Q12792 350 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 CHIT1Q13231 466 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 PUM1Q14671 1186 aaKnown RBP eCLIP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ZNF385BQ569K4 471 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ATXN7L2Q5T6C5 722 aaPredicted RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ACSM2BQ68CK6 577 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 LIPIQ6XZB0 460 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 OR52N2Q8NGI0 321 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 HGDQ93099 445 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ZSWIM3Q96MP5 696 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 SYT17Q9BSW7 474 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 SPATA6Q9NWH7 488 aaPredicted RBP12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ZSCAN32Q9NX65 697 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ASB4Q9Y574 426 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 STON1Q9Y6Q2 735 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 RNF215Q9Y6U7 377 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 A0A1B0GVM2 712 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 H3BN98 237 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 CBX4O00257 560 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 RNASET2O00584 256 aaKnown RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 CD160O95971 181 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 TP53P04637 393 aaPredicted RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 IFNW1P05000 195 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 CFL1P23528 166 aaKnown RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 SSTR2P30874 369 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 GABRA5P31644 462 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 CCT3P49368 545 aaKnown RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 RPS24P62847 133 aaKnown RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 ADAM15Q13444 863 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 DSG2Q14126 1118 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 CCDC85BQ15834 202 aaPredicted RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 SYT14P1Q58G82 188 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 C3orf38Q5JPI3 329 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 UNC5DQ6UXZ4 953 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 UBE2R2Q712K3 238 aaPredicted RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 ADGRD2Q7Z7M1 963 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 BMPERQ8N8U9 685 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 OR10Z1Q8NGY1 313 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 CEP76Q8TAP6 659 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 WDR20Q8TBZ3 569 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 MTERF1Q99551 399 aaKnown RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 PKP4Q99569 1192 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 P2RY13Q9BPV8 354 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 SLC35A5Q9BS91 424 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 IL26Q9NPH9 171 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 PIM2Q9P1W9 311 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 ACSL6Q9UKU0 697 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 DNAH12Q6ZR08 3092 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 TFPIP10646 304 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 TYMPP19971 482 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 ITGALP20701 1170 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 HSF2Q03933 536 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 PUDPQ08623 228 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 DDX39BQ13838 428 aaKnown RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 TMEM91Q6ZNR0 172 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 RTL4Q6ZR62 310 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 FAM26EQ8N5C1 309 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 IQCF1Q8N6M8 205 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 TTC9BQ8N6N2 239 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 OR8K5Q8NH50 307 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 GOT1L1Q8NHS2 421 aaPredicted RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 APOBEC4Q8WW27 367 aaKnown RBP12.15□□□□□ -0.46
CCDC60-201ENST00000327554 GATAD2BQ8WXI9 593 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 FBXO32Q969P5 355 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 RNF32Q9H0A6 362 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms