RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	VLDLR	P98155	873 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	B4GALNT1	Q00973	533 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	C6orf132	Q5T0Z8	1188 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	ANKRD54	Q6NXT1	300 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	FAM131A	Q6UXB0	335 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771		Q6ZNB5	142 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	PDZD3	Q86UT5	571 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	UBE2F	Q969M7	185 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	NAA50	Q9GZZ1	169 aa	Known RBP	11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	DCAF13	Q9NV06	445 aa	Known RBP	11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	NEU3	Q9UQ49	428 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	POFUT2	Q9Y2G5	429 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	MRPS17	Q9Y2R5	130 aa	Known RBP	11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	GPR179	Q6PRD1	2367 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	FAM227A	F5H4B4	570 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	HMGN2	P05204	90 aa	Known RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	TFAP2A	P05549	437 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	LCK	P06239	509 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	FCER2	P06734	321 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	HSD3B1	P14060	373 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ZNF26	P17031	533 aa	Predicted RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	HSD3B2	P26439	372 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	MLLT3	P42568	568 aa	Predicted RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	SUOX	P51687	545 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	MAP4K2	Q12851	820 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	CCNJ	Q5T5M9	372 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	SLC30A6	Q6NXT4	461 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	FIGLA	Q6QHK4	219 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ABHD13	Q7L211	337 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	IZUMO1	Q8IYV9	350 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	OR2L2	Q8NH16	312 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	PATE1	Q8WXA2	126 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	FATE1	Q969F0	183 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	PEX11G	Q96HA9	241 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	PRR14	Q9BWN1	585 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	GTPBP2	Q9BX10	602 aa	Known RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	GPR83	Q9NYM4	423 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	SLC23A2	Q9UGH3	650 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	GMEB2	Q9UKD1	530 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	PCM1	Q15154	2024 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	POM121B	A6NF01	834 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	DUXA	A6NLW8	204 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	FXYD1	O00168	92 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	COQ9	O75208	318 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	CSTF2	P33240	577 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ERV3-1	Q14264	604 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	SYPL1	Q16563	259 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ODF4	Q2M2E3	257 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	LEXM	Q3ZCV2	418 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	SHQ1	Q6PI26	577 aa	Known RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	TBPL2	Q6SJ96	375 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	SLCO4C1	Q6ZQN7	724 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	PIWIL3	Q7Z3Z3	882 aa	Known RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	LHFPL3	Q86UP9	236 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	DCP2	Q8IU60	420 aa	Known RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	OR9A2	Q8NGT5	310 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	SETD7	Q8WTS6	366 aa	Known RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	FAM3C	Q92520	227 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	TFAP2C	Q92754	450 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ECHDC3	Q96DC8	303 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	C5orf34	Q96MH7	638 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	TEX10	Q9NXF1	929 aa	Predicted RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	CLDN25	C9JDP6	229 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ARNTL	O00327	626 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	MAGEB3	O15480	346 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ARHGEF9	O43307	516 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	GPR37L1	O60883	481 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	IFI30	P13284	250 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	NPPB	P16860	134 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	KCNC4	Q03721	635 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	LPAL2	Q16609	132 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	COX20	Q5RI15	118 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	RBM48	Q5RL73	367 aa	Known RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	CYHR1	Q6ZMK1	362 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ZNF852	Q6ZMS4	543 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	SHISA6	Q6ZSJ9	500 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	TMC8	Q8IU68	726 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ERI1	Q8IV48	349 aa	Known RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	OR4C6	Q8NH72	309 aa		11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	CAB39	Q9Y376	341 aa	Predicted RBP	11.26	□□□□□ -0.61
DDR1-223	ENST00000324771	ANKRD33B	A6NCL7	494 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	SLC1A7	O00341	560 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	PPM1D	O15297	605 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	PSIP1	O75475	530 aa	Known RBP	11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	MRPL3	P09001	348 aa	Known RBP	11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	ACSL1	P33121	698 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	GPR4	P46093	362 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	HMBOX1	Q6NT76	420 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	ACOT4	Q8N9L9	421 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	CAPSL	Q8WWF8	208 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	PTCHD1	Q96NR3	888 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	MKRN2	Q9H000	416 aa	Known RBP	11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	BRD7	Q9NPI1	651 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	PPT2	Q9UMR5	302 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	EIF3F	O00303	357 aa	Predicted RBP	11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	ZNF821	O75541	412 aa	Predicted RBP	11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	NCS1	P62166	190 aa		11.25	□□□□□ -0.61
DDR1-223	ENST00000324771	HHEX	Q03014	270 aa		11.25	□□□□□ -0.61

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