RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ID2Q02363 134 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 VAC14Q08AM6 782 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 C11orf91Q3C1V1 193 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 SPDYE7PQ495Y7 208 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 KLHL35Q6PF15 583 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 TMEM107Q6UX40 140 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 SZRD1Q7Z422 152 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 TMEM179BQ7Z7N9 219 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 SDR16C5Q8N3Y7 309 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 SIMC1Q8NDZ2 872 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 OR9A2Q8NGT5 310 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 GAB3Q8WWW8 586 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 TMBIM1Q969X1 311 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 HSH2DQ96JZ2 352 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 BTBD9Q96Q07 612 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 TMEM38AQ9H6F2 299 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 VNN3Q9NY84 501 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 TMEM9Q9P0T7 183 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 SLC22A7Q9Y694 548 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 AP4B1Q9Y6B7 739 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 PRAMEF27A3QJZ7 478 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 HMGN4O00479 90 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 EI24O14681 340 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 GALR3O60755 368 aaPredicted RBP17.36■□□□□ 0.37
USP39-201ENST00000323701 DIRAS1O95057 198 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 CST1P01037 141 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 NTSP30990 170 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 GABRA4P48169 554 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 CDK6Q00534 326 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 TEAD4Q15561 434 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 CYP27C1Q4G0S4 372 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 ANKRD34AQ69YU3 496 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 SPRED1Q7Z699 444 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 OR5D16Q8NGK9 328 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 OR9A4Q8NGU2 314 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 TAMM41Q96BW9 452 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 TPD52L3Q96J77 140 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 UBAP1Q9NZ09 502 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 ZNF639Q9UID6 485 aa17.36■□□□□ 0.37
USP39-201ENST00000323701 SAMD4AQ9UPU9 718 aaKnown RBP17.36■□□□□ 0.37
USP39-201ENST00000323701 URADA6NGE7 173 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 hCG_2039718K7EN88 272 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 B4GAT1O43505 415 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 ARAFP10398 606 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 ZNF23P17027 643 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 TNFRSF1BP20333 461 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 GPC1P35052 558 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 SOX18P35713 384 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 MAGEA2P43356 314 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 DSTNP60981 165 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 MAP7Q14244 749 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 KCNAB1Q14722 419 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 CEBPEQ15744 281 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 CYBRD1Q53TN4 286 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 RPS26P11Q5JNZ5 115 aaPredicted RBP17.35■□□□□ 0.37
USP39-201ENST00000323701 INTS11Q5TA45 600 aaKnown RBP17.35■□□□□ 0.37
USP39-201ENST00000323701 ISLR2Q6UXK2 745 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 EIF3MQ7L2H7 374 aaKnown RBP17.35■□□□□ 0.37
USP39-201ENST00000323701 OLIG3Q7RTU3 272 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 EID3Q8N140 333 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 Q8N9G6 341 aaPredicted RBP17.35■□□□□ 0.37
USP39-201ENST00000323701 DOK4Q8TEW6 326 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 SLC38A5Q8WUX1 472 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 PIGKQ92643 395 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 KAT2AQ92830 837 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 GATA6Q92908 595 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 YIPF4Q9BSR8 244 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 MAGIXQ9H6Y5 334 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 IGHV1OR21-1A0A087WYE8 117 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 RDH16O75452 317 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 CSNK2A2P19784 350 aaPredicted RBP17.35■□□□□ 0.37
USP39-201ENST00000323701 PRKAG1P54619 331 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 PRTGQ2VWP7 1150 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 AMZ1Q400G9 498 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 TSEN54Q7Z6J9 526 aaKnown RBP17.35■□□□□ 0.37
USP39-201ENST00000323701 ARL10Q8N8L6 244 aa17.35■□□□□ 0.37
USP39-201ENST00000323701 ZCCHC3Q9NUD5 404 aaKnown RBP17.35■□□□□ 0.37
USP39-201ENST00000323701 PRAMEF25A6NGN4 478 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 M0QX08 132 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 CYR61O00622 381 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 LDB3O75112 727 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 DEAF1O75398 565 aaPredicted RBP17.34■□□□□ 0.37
USP39-201ENST00000323701 UBTFL6P0CB48 400 aaPredicted RBP17.34■□□□□ 0.37
USP39-201ENST00000323701 MC3RP41968 323 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 KCNJ10P78508 379 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 SHC2P98077 582 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 IQCCQ4KMZ1 466 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 OTUD3Q5T2D3 398 aaPredicted RBP17.34■□□□□ 0.37
USP39-201ENST00000323701 OR52E8Q6IFG1 317 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 USP53Q70EK8 1073 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 KANSL1Q7Z3B3 1105 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 ZDHHC21Q8IVQ6 265 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 SLC44A2Q8IWA5 706 aaPredicted RBP17.34■□□□□ 0.37
USP39-201ENST00000323701 OR2I1PQ8NGU4 316 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 TBC1D20Q96BZ9 403 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 C16orf58Q96GQ5 468 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 BDH2Q9BUT1 245 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 ROGDIQ9GZN7 287 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 DNAJB9Q9UBS3 223 aa17.34■□□□□ 0.37
USP39-201ENST00000323701 ENTPD4Q9Y227 616 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms