RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 NLGN3Q9NZ94 848 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 EDDM13A0A1B0GTR0 161 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 REM1O75628 298 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 MGAT3Q09327 533 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 ZNF155Q12901 538 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-201ENST00000323668 AGAP6Q5VW22 663 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 VITQ6UXI7 678 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 TCEAL8Q8IYN2 117 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 AGAP4Q96P64 663 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 DUSP21Q9H596 190 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 NTN4Q9HB63 628 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 IKZF2Q9UKS7 526 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 GNG2P59768 71 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 PRKCDQ05655 676 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 SLC3A1Q07837 685 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 LIN54Q6MZP7 749 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 FRRS1Q6ZNA5 592 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 OR8H3Q8N146 312 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 METTL4Q8N3J2 472 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 GDPD1Q8N9F7 314 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 OR51G2Q8NGK0 314 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 NARS2Q96I59 477 aaKnown RBP14.06□□□□□ -0.16
TCOF1-201ENST00000323668 SECISBP2Q96T21 854 aaKnown RBP14.06□□□□□ -0.16
TCOF1-201ENST00000323668 HCN2Q9UL51 889 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 PCDHGA2Q9Y5H1 932 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 SSC5DA1L4H1 1573 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 GTPBP1O00178 669 aaKnown RBP14.06□□□□□ -0.16
TCOF1-201ENST00000323668 PCDH17O14917 1159 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 ANKRD28O15084 1053 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 FGF18O76093 207 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 APODP05090 189 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 PRR35P0CG20 571 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 IL7P13232 177 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 NUP62P37198 522 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-201ENST00000323668 SOX3P41225 446 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 PAMR1Q6UXH9 720 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 HMGN2P46Q86SG4 172 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 CPA6Q8N4T0 437 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 ATP6V1C2Q8NEY4 427 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 SETD6Q8TBK2 473 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 ISG20Q96AZ6 181 aaKnown RBP14.06□□□□□ -0.16
TCOF1-201ENST00000323668 DPAGT1Q9H3H5 408 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 IGFLR1Q9H665 355 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 KCNK12Q9HB15 430 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 EXTL2Q9UBQ6 330 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 WDR45Q9Y484 360 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 QSER1Q2KHR3 1735 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 SLC31A1O15431 190 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 MTNR1AP48039 350 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 SLC5A12Q1EHB4 618 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 USP51Q70EK9 711 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 ENTHD1Q8IYW4 607 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 CLSTN3Q9BQT9 956 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 ENAMQ9NRM1 1142 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 GREB1LQ9C091 1923 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-201ENST00000323668 KMOO15229 486 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 PCDHGA12O60330 932 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 TSPAN12O95859 305 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 ADORA3P0DMS8 318 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 TNFSF8P32971 234 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 PIN1Q13526 163 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-201ENST00000323668 STEAP3Q658P3 488 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 KIAA1324Q6UXG2 1013 aaKnown RBP14.06□□□□□ -0.16
TCOF1-201ENST00000323668 HSD11B1LQ7Z5J1 315 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 FAM124AQ86V42 546 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 IQCF1Q8N6M8 205 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 PSD4Q8NDX1 1056 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 OTUB2Q96DC9 234 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 CAPNS2Q96L46 248 aa14.06□□□□□ -0.16
TCOF1-201ENST00000323668 CPEB1Q9BZB8 566 aaKnown RBP14.06□□□□□ -0.16
TCOF1-201ENST00000323668 B3GALT2O43825 422 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 ADAMTS4O75173 837 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 IL1RNP18510 177 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 GBX2P52951 348 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-201ENST00000323668 SLC46A3Q7Z3Q1 461 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 SRMSQ9H3Y6 488 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 DMRT3Q9NQL9 472 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 ZNF224Q9NZL3 707 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 NDOR1Q9UHB4 597 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 BTN3A2P78410 334 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 RPS26P11Q5JNZ5 115 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-201ENST00000323668 TOR1AIP1Q5JTV8 583 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 SLC35F1Q5T1Q4 408 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 PARGQ86W56 976 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 ZFP41Q8N8Y5 198 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 TRMT2BQ96GJ1 504 aaKnown RBP14.05□□□□□ -0.16
TCOF1-201ENST00000323668 TP63Q9H3D4 680 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-201ENST00000323668 KLK4Q9Y5K2 254 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 J3QLW9 94 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 IGLV3-27P01718 113 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 ACRP10323 421 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 ZNF19P17023 458 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 PSMA3P25788 255 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 KHDRBS2Q5VWX1 349 aaKnown RBP14.05□□□□□ -0.16
TCOF1-201ENST00000323668 TMC8Q8IU68 726 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 CADM3Q8N126 398 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 GHDCQ8N2G8 530 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 HDDC3Q8N4P3 179 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 SUN3Q8TAQ9 357 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 HDHD5Q9BXW7 423 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms