RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 RAI2Q9Y5P3 530 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 hCG_1807616A0A1W2PRN6 198 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CKMP06732 381 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 RPS12P25398 132 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CTNNB1P35222 781 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 MAGEA6P43360 314 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 DSC2Q02487 901 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 SPANXN4Q5MJ08 99 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 RNF130Q86XS8 419 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ZFPM1Q8IX07 1006 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CELF2-AS1Q8N7Q2 184 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 OR2T33Q8NG76 320 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 LHFPL5Q8TAF8 219 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 C1QTNF7Q9BXJ2 289 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 OR51V1Q9H2C8 321 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 SLC32A1Q9H598 525 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 APOBEC3GQ9HC16 384 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 TNRC6AQ8NDV7 1962 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 NRCAMQ92823 1304 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 NARSO43776 548 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 PCDH7O60245 1069 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 IFNA21P01568 189 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 EDNRAP25101 427 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 DUSP7Q16829 419 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 LRRC26Q2I0M4 334 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 SLC39A12Q504Y0 691 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 FKBP1CQ5VVH2 108 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 KIAA0319LQ8IZA0 1049 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 TCEANCQ8N8B7 351 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 HASPINQ8TF76 798 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ZDHHC1Q8WTX9 485 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 SLC5A11Q8WWX8 675 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 LRCH3Q96II8 777 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 SPATC1LQ9H0A9 340 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 KIF25Q9UIL4 384 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 COL1A1P02452 1464 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 LRP5O75197 1615 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 HOXC11O43248 304 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 OR10H2O60403 315 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ALDOBP05062 364 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ARSBP15848 533 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 RHOQP17081 205 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 MTNR1AP48039 350 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 PER3P56645 1201 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 IL10RBQ08334 325 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF630Q2M218 657 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 SLC30A6Q6NXT4 461 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 C3orf49Q96BT1 292 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 FCRL3Q96P31 734 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 DNTTIP1Q9H147 329 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 MEPEQ9NQ76 525 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 KLHL9Q9P2J3 617 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CREMQ03060 361 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CHIT1Q13231 466 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 TNFAIP8L2Q6P589 184 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 SERPINA11Q86U17 422 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 HCAR2Q8TDS4 363 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 IKZF2Q9UKS7 526 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 THADAQ6YHU6 1953 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 PIGBOS1A0A0B4J2F0 54 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 BET1O15155 118 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 AGXTP21549 392 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 GABRB3P28472 473 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 EPHB3P54753 998 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 EVX2Q03828 476 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 GPR68Q15743 365 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 ZBTB37Q5TC79 503 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 LYSMD3Q7Z3D4 306 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 IL31RAQ8NI17 732 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 NAA50Q9GZZ1 169 aaKnown RBP6.77□□□□□ -1.32
SMC1A-201ENST00000322213 TMEM27Q9HBJ8 222 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 OSGIN1Q9UJX0 560 aa6.77□□□□□ -1.32
SMC1A-201ENST00000322213 BORCS7-ASMTA0A0B4J1R7 106 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 H7C1Q1 480 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 C22orf31O95567 290 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF35P13682 527 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 SPRED1Q7Z699 444 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 IQCHQ86VS3 1027 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 MON1AQ86VX9 555 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TMEM151AQ8N4L1 468 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PNLDC1Q8NA58 520 aaKnown RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF248Q8NDW4 579 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 OR8J1Q8NGP2 316 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 UPF1Q92900 1129 aaKnown RBP eCLIP6.77□□□□□ -1.333e-6■■□□□ 14
SMC1A-201ENST00000322213 TIFAQ96CG3 184 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF649Q9BS31 505 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PCDHB14Q9Y5E9 798 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 DNAJB6O75190 326 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 KAT7O95251 611 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 FCER2P06734 321 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 GIFP27352 417 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 THPOP40225 353 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 DIO3P55073 304 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CD47Q08722 323 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CHAF1BQ13112 559 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 GRB7Q14451 532 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PAN2Q504Q3 1202 aaKnown RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 SLC38A6Q8IZM9 456 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 DNAJC22Q8N4W6 341 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PQLC3Q8N755 202 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms