RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 GPC3P51654 580 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SMSP52788 366 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 AP3M2P53677 418 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 HSDL1Q3SXM5 330 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 CFAP221Q4G0U5 840 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SLC25A53Q5H9E4 307 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF770Q6IQ21 691 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 ARMCX2Q7L311 632 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 C16orf82Q7Z2V1 217 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 NUDT13Q86X67 352 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SPATA2LQ8IUW3 424 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 PLD3Q8IV08 490 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 TDHQ8IZJ6 230 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 PPFIBP2Q8ND30 876 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SECTM1Q8WVN6 248 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 CTNNBL1Q8WYA6 563 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 C5orf30Q96GV9 206 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 CAPZA3Q96KX2 299 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 GDAP1L1Q96MZ0 367 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF583Q96ND8 569 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 IL17FQ96PD4 163 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SHARPINQ9H0F6 387 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SPG21Q9NZD8 308 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 POU2F3Q9UKI9 436 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 FAF1Q9UNN5 650 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 RUVBL2Q9Y230 463 aaKnown RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 KCNK6Q9Y257 313 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 OTOFQ9HC10 1997 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 PTPRFP10586 1907 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 KIAA1217Q5T5P2 1943 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 PAPPA2Q9BXP8 1791 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 ADGRA3Q8IWK6 1321 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 A0A1W2PPI3 338 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 LRRIQ3A6PVS8 624 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 MAGEB2O15479 319 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 TOM1L1O75674 476 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 PALMO75781 387 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SLC4A1P02730 911 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SP9P0CG40 484 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 GZMAP12544 262 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 CDH3P22223 829 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 TMOD1P28289 359 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 CDKN2AP42771 156 aaKnown RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 GAS1P54826 345 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 LAMTOR4Q0VGL1 99 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SQLEQ14534 574 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 KIR2DS3Q14952 304 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 HERC3Q15034 1050 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 MAPK6Q16659 721 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 C1orf220Q5T0J3 134 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 C9orf57Q5W0N0 161 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SLC39A4Q6P5W5 647 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 PRSS57Q6UWY2 283 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 UNQ6126/PRO20091Q6UXV3 157 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF554Q86TJ5 538 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 MEX3DQ86XN8 651 aaKnown RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SIAH3Q8IW03 269 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 FBXO16Q8IX29 292 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 FAM71AQ8IYT1 594 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 DCP1BQ8IZD4 617 aaKnown RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 CIARTQ8N365 385 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 IQCF1Q8N6M8 205 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 METTL13Q8N6R0 699 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 LRTM2Q8N967 370 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF383Q8NA42 475 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 RIMS4Q9H426 269 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SDR39U1Q9NRG7 319 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 RBAKQ9NYW8 714 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SLC7A7Q9UM01 511 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 MYH9P35579 1960 aaKnown RBP3.66□□□□□ -1.82
SMCO3-201ENST00000316048 IGLV5-45A0A087WSX0 123 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 IGKV6-21A0A0C4DH24 114 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 SLC15A5A6NIM6 579 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 TMCO5BA8MYB1 307 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 FPGTO14772 594 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 XPNPEP2O43895 674 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 CRCPO75575 148 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 IGHV4-39P01824 125 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 RHOXF2BP0C7M4 288 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 F3P13726 295 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF23P17027 643 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 GOT1P17174 413 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 MARK3P27448 753 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 CD86P42081 329 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 ACOT2P49753 483 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 CASP9P55211 416 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 ARHGAP1Q07960 439 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 LGALS3BPQ08380 585 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 LYSMD4Q5XG99 296 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 OR4A47Q6IF82 309 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 CAPRIN2Q6IMN6 1127 aaKnown RBP3.66□□□□□ -1.82
SMCO3-201ENST00000316048 PPP1R2P3Q6NXS1 205 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 TUBA1AQ71U36 451 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 PEX26Q7Z412 305 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 GPR142Q7Z601 462 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF677Q86XU0 584 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 MMGT1Q8N4V1 131 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 RTL3Q8N8U3 475 aaKnown RBP3.66□□□□□ -1.82
SMCO3-201ENST00000316048 CCDC63Q8NA47 563 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms