RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 DOCK9Q9BZ29 2069 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 KIAA1549LQ6ZVL6 1849 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 LINC00854A0A1B0GVQ3 168 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 CCRL2O00421 344 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 NME6O75414 186 aaPredicted RBP24.04■■□□□ 1.44
HOXB3-201ENST00000311626 CD72P21854 359 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 DDX6P26196 483 aaKnown RBP eCLIP24.04■■□□□ 1.44
HOXB3-201ENST00000311626 ATAD3BQ5T9A4 648 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 Q8N9G6 341 aaPredicted RBP24.04■■□□□ 1.44
HOXB3-201ENST00000311626 TPK1Q9H3S4 243 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 TRPC4Q9UBN4 977 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 KCND3Q9UK17 655 aa24.04■■□□□ 1.44
HOXB3-201ENST00000311626 PSMD11O00231 422 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 KMOO15229 486 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 LCMT2O60294 686 aaKnown RBP24.03■■□□□ 1.44
HOXB3-201ENST00000311626 ZNF557Q8N988 423 aaPredicted RBP24.03■■□□□ 1.44
HOXB3-201ENST00000311626 XKR8Q9H6D3 395 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 TVP23BQ9NYZ1 205 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 EHD3Q9NZN3 535 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 CXXC1Q9P0U4 656 aaPredicted RBP24.03■■□□□ 1.44
HOXB3-201ENST00000311626 SCAMP1O15126 338 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 RGS5O15539 181 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 LRRTM2O43300 516 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 OR1F1O43749 312 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 OSMP13725 252 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 RPS19P39019 145 aaKnown RBP24.03■■□□□ 1.44
HOXB3-201ENST00000311626 MAGEA8P43361 318 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 XKP51811 444 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 LTBP2Q14767 1821 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 LCTLQ6UWM7 567 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 UNC5DQ6UXZ4 953 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 GPR65Q8IYL9 337 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 C12orf76Q8N812 135 aaPredicted RBP24.03■■□□□ 1.44
HOXB3-201ENST00000311626 UBE2E3Q969T4 207 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 SLC6A18Q96N87 628 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 SDHCQ99643 169 aaPredicted RBP24.03■■□□□ 1.44
HOXB3-201ENST00000311626 MS4A8Q9BY19 250 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 SP140LQ9H930 580 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 ICKQ9UPZ9 632 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 KLK4Q9Y5K2 254 aa24.03■■□□□ 1.44
HOXB3-201ENST00000311626 CSO75390 466 aaKnown RBP24.02■■□□□ 1.44
HOXB3-201ENST00000311626 MED26O95402 600 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 NTN1O95631 604 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 ITGB7P26010 798 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 GJA8P48165 433 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 OLR1P78380 273 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 MXD1Q05195 221 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 ZNF750Q32MQ0 723 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 CCBE1Q6UXH8 406 aaPredicted RBP24.02■■□□□ 1.44
HOXB3-201ENST00000311626 AMZ2Q86W34 360 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 SLC7A13Q8TCU3 470 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 SETD7Q8WTS6 366 aaKnown RBP24.02■■□□□ 1.44
HOXB3-201ENST00000311626 OR5P2Q8WZ92 322 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 POLR2J3Q9H1A7 115 aaKnown RBP24.02■■□□□ 1.44
HOXB3-201ENST00000311626 SEC14L3Q9UDX4 400 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 PTPRSQ13332 1948 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 SMIM30A4D0T7 59 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 HAT1O14929 419 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 H1F0P07305 194 aaKnown RBP24.02■■□□□ 1.44
HOXB3-201ENST00000311626 KELP23276 732 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 CTNNB1P35222 781 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 PRKCDQ05655 676 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 CDC20Q12834 499 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 ARHGEF6Q15052 776 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 ZMAT1Q5H9K5 638 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 IKBIPQ70UQ0 350 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 ASPNQ9BXN1 380 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 DPEP2Q9H4A9 486 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 SLC25A19Q9HC21 320 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 SNTG1Q9NSN8 517 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 AHSPQ9NZD4 102 aa24.02■■□□□ 1.44
HOXB3-201ENST00000311626 MRPS23Q9Y3D9 190 aaKnown RBP24.02■■□□□ 1.44
HOXB3-201ENST00000311626 DSPPQ9NZW4 1301 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 SAGE2PA6NJ88 616 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 A8MVJ9 347 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 TIMP1P01033 207 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 SLC15A1P46059 708 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 CCT3P49368 545 aaKnown RBP24.01■■□□□ 1.43
HOXB3-201ENST00000311626 PDZD3Q86UT5 571 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 OR8D1Q8WZ84 308 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 SMPDL3AQ92484 453 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 BARHL1Q9BZE3 327 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 GPC6Q9Y625 555 aaPredicted RBP24.01■■□□□ 1.43
HOXB3-201ENST00000311626 ISPDA4D126 451 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 SOX6P35712 828 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 NR4A2P43354 598 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 ZNF45Q02386 682 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 SPANXN2Q5MJ10 180 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 PGBD2Q6P3X8 592 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 TUBA3EQ6PEY2 450 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 REM2Q8IYK8 340 aaPredicted RBP24.01■■□□□ 1.43
HOXB3-201ENST00000311626 OR8H2Q8N162 312 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 CEP19Q96LK0 163 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 TREX2Q9BQ50 279 aaPredicted RBP24.01■■□□□ 1.43
HOXB3-201ENST00000311626 CPNE5Q9HCH3 593 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 A4GALTQ9NPC4 353 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 PEX16Q9Y5Y5 336 aa24.01■■□□□ 1.43
HOXB3-201ENST00000311626 SH3D21A4FU49 640 aa24■■□□□ 1.43
HOXB3-201ENST00000311626 CAPN5O15484 640 aaPredicted RBP24■■□□□ 1.43
HOXB3-201ENST00000311626 AZGP1P25311 298 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms