RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 AP1S1P61966 158 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 LSM11P83369 360 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 FABP5Q01469 135 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 MEF2AQ02078 507 aaPredicted RBP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 CSTF1Q05048 431 aaKnown RBP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 PCDH1Q08174 1060 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 MRPL58Q14197 206 aaKnown RBP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 ZNF770Q6IQ21 691 aaPredicted RBP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 SZRD1Q7Z422 152 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 OXR1Q8N573 874 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 GALNT6Q8NCL4 622 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 TTC9Q92623 222 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 CLP1Q92989 425 aaKnown RBP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 MCOLN1Q9GZU1 580 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 MGAT4AQ9UM21 535 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 ALPK3Q96L96 1907 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 C2orf92A0A1B0GVN3 265 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 ANKDD1BA6NHY2 528 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 GTPBP1O00178 669 aaKnown RBP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 OR7A10O76100 309 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 ADAP00813 363 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 ZDHHC11BP0C7U3 371 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 SOX18P35713 384 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 NUDT1P36639 197 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 CD79BP40259 229 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 TAS2R50P59544 299 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 LDLRAD1Q5T700 205 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 BCL2L15Q5TBC7 163 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 UNC5DQ6UXZ4 953 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 CDH24Q86UP0 819 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 FCRL1Q96LA6 429 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 REEP4Q9H6H4 257 aa13.96□□□□□ -0.17
COL6A2-202ENST00000310645 HCN1O60741 890 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 RAB36O95755 333 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF30P17039 623 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 ATF4P18848 351 aaPredicted RBP13.96□□□□□ -0.18
COL6A2-202ENST00000310645 AP2S1P53680 142 aaPredicted RBP13.96□□□□□ -0.18
COL6A2-202ENST00000310645 ILKQ13418 452 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 PIN1Q13526 163 aaPredicted RBP13.96□□□□□ -0.18
COL6A2-202ENST00000310645 GINS1Q14691 196 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 AGTRAPQ6RW13 159 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 RTN4RL1Q86UN2 441 aaPredicted RBP13.96□□□□□ -0.18
COL6A2-202ENST00000310645 GRAMD2AQ8IUY3 354 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 LIX1LQ8IVB5 337 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 WDR48Q8TAF3 677 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 HYLS1Q96M11 299 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 PARK7Q99497 189 aaKnown RBP13.96□□□□□ -0.18
COL6A2-202ENST00000310645 PTPN18Q99952 460 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 WFDC6Q9BQY6 131 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 PAK6Q9NQU5 681 aaPredicted RBP13.96□□□□□ -0.18
COL6A2-202ENST00000310645 DIABLOQ9NR28 239 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 SEMA3GQ9NS98 782 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF224Q9NZL3 707 aa13.96□□□□□ -0.18
COL6A2-202ENST00000310645 RECKO95980 971 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 ENPP1P22413 925 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 BDKRB1P46663 353 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 PREPP48147 710 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 CLDN20P56880 219 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 PPP3R1P63098 170 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF630Q2M218 657 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 CHST9Q7L1S5 443 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 C9orf62Q8N4C0 152 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 LILRA3Q8N6C8 439 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 OR4K3Q96R72 315 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 DCLRE1CQ96SD1 692 aaKnown RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 MED28Q9H204 178 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 PPP1R3EQ9H7J1 279 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 FZD3Q9NPG1 666 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 A0A1W2PRB8 838 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF840PA6NDX5 716 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 TMEM202A6NGA9 273 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 ADAM12O43184 909 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 PROM1O43490 865 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 SLC22A5O76082 557 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 LGI1O95970 557 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 M6PRP20645 277 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 OPRD1P41143 372 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 GATMP50440 423 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 DSTNP60981 165 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 WDR5P61964 334 aaKnown RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 DSC1Q08554 894 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 GPR17Q13304 367 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 RTP2Q5QGT7 225 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 ZBTB37Q5TC79 503 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 MARCH9Q86YJ5 346 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 FBXL6Q8N531 539 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 SLC9A6Q92581 669 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 SCAMP4Q969E2 229 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 ARHGAP39Q9C0H5 1083 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 RC3H2Q9HBD1 1191 aaKnown RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 C12orf4Q9NQ89 552 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 B3GNT2Q9NY97 397 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 GSAPA4D1B5 854 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 ARHGEF33A8MVX0 844 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 NME6O75414 186 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 H1F0P07305 194 aaKnown RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 CPEP16870 476 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms