RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 C9orf43Q8TAL5 461 aaPredicted RBP7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 GEMIN6Q8WXD5 167 aaKnown RBP7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 ZNF175Q9Y473 711 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 TESMINQ9Y4I5 508 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 PIP5K1BO14986 540 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 RNF13O43567 381 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 BRINP1O60477 761 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 POU2F2P09086 479 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 SEPHS1P49903 392 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 DCDC1P59894 354 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 GK3PQ14409 553 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 GNMTQ14749 295 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 DUOXA1Q1HG43 343 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 HDHD5Q9BXW7 423 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 IKZF4Q9H2S9 585 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 HPF1Q9NWY4 346 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 SCP2D1Q9UJQ7 156 aa7.99□□□□□ -1.13
PCDHB1-201ENST00000306549 BCAT2O15382 392 aaPredicted RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 UNC5CO95185 931 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 RPLP0P05388 317 aaKnown RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 PROS1P07225 676 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 S100PP25815 95 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 FOLH1Q04609 750 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SCARB2Q14108 478 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SLC5A9Q2M3M2 681 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 RBM48Q5RL73 367 aaKnown RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 IQCKQ8N0W5 287 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 CLEC1AQ8NC01 280 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 MAPKAP1Q9BPZ7 522 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 OXSMQ9NWU1 459 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 RCCD1A6NED2 376 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 B4GALT2O60909 372 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 CSN2P05814 226 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 HTR1AP08908 422 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 RAC2P15153 192 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 MSX1P28360 303 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 DSTNP60981 165 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 RACK1P63244 317 aaKnown RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 CSTF1Q05048 431 aaKnown RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 TNFAIP8L2Q6P589 184 aaPredicted RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 MAFAQ8NHW3 353 aaPredicted RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SNTG1Q9NSN8 517 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 TRNAU1APQ9NX07 287 aaKnown RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 UTS2RQ9UKP6 389 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ICKQ9UPZ9 632 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 RPH3AQ9Y2J0 694 aaPredicted RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 A0A1W2PPL8 197 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 C2orf78A6NCI8 922 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 NIPSNAP2O75323 286 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 P04436 131 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 GNRHRP30968 328 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ST3GAL3Q11203 375 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 FADDQ13158 208 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SWT1Q5T5J6 900 aaKnown RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ANKRD26P1Q6NSI1 321 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 Q6ZVL8 140 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 TRAPPC6BQ86SZ2 158 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 C12orf76Q8N812 135 aaPredicted RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 OR8H1Q8NGG4 311 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 GRPEL2Q8TAA5 225 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 STOML3Q8TAV4 291 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SYT4Q9H2B2 425 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 MYNNQ9NPC7 610 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 TVP23BQ9NYZ1 205 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 TNFRSF10DQ9UBN6 386 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 KCND3Q9UK17 655 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 HCN2Q9UL51 889 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SPO11Q9Y5K1 396 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SNX10Q9Y5X0 201 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 IFNA1P01562 189 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 S100A12P80511 92 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 USP43Q70EL4 1123 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ZDHHC21Q8IVQ6 265 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 PPP1R35Q8TAP8 253 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ZDHHC1Q8WTX9 485 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 MTERF1Q99551 399 aaKnown RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 LRRC3Q9BY71 257 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 NGBQ9NPG2 151 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ZNF226Q9NYT6 803 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ZNF224Q9NZL3 707 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 M0R036 132 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SOX1O00570 391 aaPredicted RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ZBTB11O95625 1053 aaPredicted RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 NCK1P16333 377 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 EIF1AXP47813 144 aaKnown RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 RGS19P49795 217 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SLC15A3Q8IY34 581 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 TMEM41AQ96HV5 264 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ZNF578Q96N58 590 aaPredicted RBP7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 EPHX3Q9H6B9 360 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 FABP12A6NFH5 140 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 MAP2K7O14733 419 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 UGT2B10P36537 528 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 SCGB2A2Q13296 93 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 MFSD13AQ14CX5 517 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 FAM78AQ5JUQ0 283 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ABHD17BQ5VST6 288 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 P2RY8Q86VZ1 359 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 PARP8Q8N3A8 854 aa7.98□□□□□ -1.13
PCDHB1-201ENST00000306549 ZNF283Q8N7M2 679 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms