RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 SLC22A7Q9Y694 548 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 RNF215Q9Y6U7 377 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 KLRG2A4D1S0 409 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 TMEM200CA6NKL6 621 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 BUD23O43709 281 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 UQCRC2P22695 453 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 OR1E1P30953 314 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 VSX2P58304 361 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 RAB1AP62820 205 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 DEFA5Q01523 94 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SLC3A1Q07837 685 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ZIK1Q3SY52 487 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 HBMQ6B0K9 141 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FAM122BQ7Z309 247 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SYNPOQ8N3V7 929 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ZFAND1Q8TCF1 268 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FCRL1Q96LA6 429 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FCRL4Q96PJ5 515 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 CCM2Q9BSQ5 444 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SEMA6AQ9H2E6 1030 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 TOR3AQ9H497 397 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 TAS2R14Q9NYV8 317 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SALL4Q9UJQ4 1053 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PADI2Q9Y2J8 665 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 A0A1B0GTQ1 180 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ZSCAN5BA6NJL1 495 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 AGAP14A8MT82 685 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ATP6V1G2-DDX39BF2Z307 99 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 BOLA2-SMG1P6H3BVE0 249 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 GADD45GO95257 159 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ARP10275 920 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 HOXB1P14653 301 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FDXRP22570 491 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 CD96P40200 585 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ETV3P41162 512 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 RPA4Q13156 261 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 MTM1Q13496 603 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ARFRP1Q13795 201 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PCK2Q16822 640 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SLC51BQ86UW2 128 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 CILP2Q8IUL8 1156 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 MFSD6LQ8IWD5 586 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 NPAS3Q8IXF0 933 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 OR8H3Q8N146 312 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 GCDHQ92947 438 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SCRN2Q96FV2 425 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FCRL3Q96P31 734 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 OR4K3Q96R72 315 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 KATNBL1Q9H079 304 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 C11orf16Q9NQ32 467 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ACSS2Q9NR19 701 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ACTR10Q9NZ32 417 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 COMMD3Q9UBI1 195 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SLC6A5Q9Y345 797 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SH2D7A6NKC9 451 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SNRPGP15A8MWD9 76 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 KCNU1A8MYU2 1149 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 NCR1O76036 304 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SBK2P0C263 348 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ZNF14P17017 642 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 TPH1P17752 444 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FMO3P31513 532 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 GGT2P36268 569 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 XKP51811 444 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ACTR1AP61163 376 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 LRP8Q14114 963 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 GFOD2Q3B7J2 385 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 HFE2Q6ZVN8 426 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PDZD3Q86UT5 571 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 LINGO1Q96FE5 620 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 HRASLS5Q96KN8 279 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PCYT2Q99447 389 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 IL12RB2Q99665 862 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PKP2Q99959 881 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FDXACB1Q9BRP7 624 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 BTBD2Q9BX70 525 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 HOXD1Q9GZZ0 328 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 DUSP21Q9H596 190 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SLX4Q8IY92 1834 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FER1L6Q2WGJ9 1857 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ARGFXA6NJG6 315 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 B3GAT3O94766 335 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 MSX1P28360 303 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SLC6A6P31641 620 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 RPL7AP62424 266 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 RANP62826 216 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 MEF2AQ02078 507 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ENPP7Q6UWV6 458 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 CD300LGQ6UXG3 332 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 RNF113BQ8IZP6 322 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PLA2G15Q8NCC3 412 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 LYSMD1Q96S90 227 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PITX2Q99697 317 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 GSX2Q9BZM3 304 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 B3GNT4Q9C0J1 378 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PTPRHQ9HD43 1115 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 DCAF13Q9NV06 445 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 TAS2R10Q9NYW0 307 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 KIAA1522Q9P206 1035 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ZNF225Q9UK10 706 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms