RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 PUM1Q14671 1186 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMG8-201ENST00000300917 PHF10Q8WUB8 498 aaKnown RBP13.79□□□□□ -0.2
SMG8-201ENST00000300917 MSLNLQ96KJ4 702 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 COG8Q96MW5 612 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 RDH12Q96NR8 316 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 AMDHD1Q96NU7 426 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 GPR174Q9BXC1 333 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 DDX31Q9H8H2 851 aaKnown RBP13.79□□□□□ -0.2
SMG8-201ENST00000300917 CAPN10Q9HC96 672 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 TUBA8Q9NY65 449 aaPredicted RBP13.79□□□□□ -0.2
SMG8-201ENST00000300917 SELENONQ9NZV5 590 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 KCNE3Q9Y6H6 103 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 PRAMEF27A3QJZ7 478 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 M0R3H8 397 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 FRS3O43559 492 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 PCDHGA12O60330 932 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 GADD45GO95257 159 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 SOX14O95416 240 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 IGFBP1P08833 259 aaPredicted RBP13.79□□□□□ -0.2
SMG8-201ENST00000300917 ZNF182P17025 639 aaPredicted RBP13.79□□□□□ -0.2
SMG8-201ENST00000300917 ZNF438Q7Z4V0 828 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 OR9A2Q8NGT5 310 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 EPS8L2Q9H6S3 715 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 PRDM7Q9NQW5 492 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 SEC14L3Q9UDX4 400 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 SEMA4FO95754 770 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 PCBP4P57723 403 aaKnown RBP13.79□□□□□ -0.2
SMG8-201ENST00000300917 SIM1P81133 766 aaPredicted RBP13.79□□□□□ -0.2
SMG8-201ENST00000300917 RFX4Q33E94 735 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 KLHL17Q6TDP4 642 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 LACC1Q8IV20 430 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 FAM3CQ92520 227 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 NEURL3Q96EH8 262 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 SLC35G5Q96KT7 338 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 RMI1Q9H9A7 625 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 KLF15Q9UIH9 416 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.79□□□□□ -0.2
SMG8-201ENST00000300917 PCDHGA4Q9Y5G9 962 aa13.79□□□□□ -0.2
SMG8-201ENST00000300917 LOC105369274A0A096LPK9 316 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 LOC102723532A0A0G2JNH3 316 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 CTSVO60911 334 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 UGT2B11O75310 529 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 DRD1P21728 446 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 NTSP30990 170 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 MC3RP41968 323 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 LIM2P55344 173 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 LSM11P83369 360 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMG8-201ENST00000300917 NPTX1Q15818 432 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 DEFB110Q30KQ9 67 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 RBM48Q5RL73 367 aaKnown RBP13.78□□□□□ -0.2
SMG8-201ENST00000300917 SAXO2Q658L1 398 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 BORAQ6PGQ7 559 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 COMTD1Q86VU5 262 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 OR4N4Q8N0Y3 316 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 CACTIN-AS1Q8N1I8 211 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 GPR32P1Q8NGA4 272 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 TOE1Q96GM8 510 aaKnown RBP13.78□□□□□ -0.2
SMG8-201ENST00000300917 TMEM38AQ9H6F2 299 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 BLOC1S6Q9UL45 172 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 PADI2Q9Y2J8 665 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 LRRC72A6NJI9 287 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 ADAMDEC1O15204 470 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 SLC16A6O15403 523 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 IFNW1P05000 195 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 HMGN2P05204 90 aaKnown RBP13.78□□□□□ -0.2
SMG8-201ENST00000300917 PSMB9P28065 219 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 HNRNPFP52597 415 aaKnown RBP13.78□□□□□ -0.2
SMG8-201ENST00000300917 BNIP3Q12983 259 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 C11orf91Q3C1V1 193 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 GPAT3Q53EU6 434 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 PRSS41Q7RTY9 318 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 AQP11Q8NBQ7 271 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 OR4D11Q8NGI4 311 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 PROX1Q92786 737 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 ARSGQ96EG1 525 aa13.78□□□□□ -0.2
SMG8-201ENST00000300917 GAS2L1Q99501 681 aaPredicted RBP13.78□□□□□ -0.2
SMG8-201ENST00000300917 TREX2Q9BQ50 279 aaPredicted RBP13.78□□□□□ -0.2
SMG8-201ENST00000300917 TRBV4-1A0A0J9YWV2 114 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 TRIM64A6NGJ6 449 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 P2RX6O15547 441 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 PRICKLE3O43900 615 aaPredicted RBP13.77□□□□□ -0.2
SMG8-201ENST00000300917 NOL3O60936 208 aaKnown RBP13.77□□□□□ -0.2
SMG8-201ENST00000300917 MAOBP27338 520 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 KRT20P35900 424 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 BUD31P41223 144 aaPredicted RBP13.77□□□□□ -0.2
SMG8-201ENST00000300917 RBBP4Q09028 425 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 PIN1Q13526 163 aaPredicted RBP13.77□□□□□ -0.2
SMG8-201ENST00000300917 FRMPD2BQ6IN97 320 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 VN1R4Q7Z5H5 301 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 ARMC8Q8IUR7 673 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 OR2L5Q8NG80 312 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 GEMIN6Q8WXD5 167 aaKnown RBP13.77□□□□□ -0.2
SMG8-201ENST00000300917 RNF31Q96EP0 1072 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 APOL4Q9BPW4 351 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 FAIM2Q9BWQ8 316 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 SPATA9Q9BWV2 254 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 RAB11FIP5Q9BXF6 653 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 NEUROD4Q9HD90 331 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 MTCH2Q9Y6C9 303 aa13.77□□□□□ -0.2
SMG8-201ENST00000300917 TNRC18O15417 2968 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms