RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 TIGD6Q17RP2 521 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 WBP2Q969T9 261 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 DMRT3Q9NQL9 472 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 PLCL2Q9UPR0 1127 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 TMEM5Q9Y2B1 443 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 DPPA5A6NC42 116 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 SSNA1O43805 119 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 PRKAR1AP10644 381 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 IL12AP29459 219 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 SLC6A6P31641 620 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 EIF1AXP47813 144 aaKnown RBP13.08□□□□□ -0.32
NPC1-201ENST00000269228 CDH11P55287 796 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 TPRG1LQ5T0D9 272 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 GPAT4Q86UL3 456 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 RBM12BQ8IXT5 1001 aaKnown RBP13.08□□□□□ -0.32
NPC1-201ENST00000269228 FCGR1BQ92637 280 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 COQ8BQ96D53 544 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 CLEC4MQ9H2X3 399 aaPredicted RBP13.08□□□□□ -0.32
NPC1-201ENST00000269228 TOR3AQ9H497 397 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 NKIRAS2Q9NYR9 191 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 OR6C2Q9NZP2 312 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 TAAR2Q9P1P5 351 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 KLHL42Q9P2K6 505 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 MGAT4BQ9UQ53 548 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 PTPRZ1P23471 2315 aaPredicted RBP13.08□□□□□ -0.32
NPC1-201ENST00000269228 ANKRD12Q6UB98 2062 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 LAMB2P55268 1798 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 ANHXE9PGG2 379 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 RDH16O75452 317 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 COLEC12Q5KU26 742 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 FAM69BQ5VUD6 431 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 ZNF765Q7L2R6 523 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 SATL1Q86VE3 508 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 ADAMTS18Q8TE60 1221 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 PPP4R1LQ9P1A2 415 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 EPHA6Q9UF33 1036 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 EMCNQ9ULC0 261 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 DOCK1Q14185 1865 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 RNF13O43567 381 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 RPLP0P05388 317 aaKnown RBP13.08□□□□□ -0.32
NPC1-201ENST00000269228 TACSTD2P09758 323 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 CDH15P55291 814 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 PER3P56645 1201 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 GBX1Q14549 363 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 ARHGAP19Q14CB8 494 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 GTDC1Q4AE62 458 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 TCEANCQ8N8B7 351 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 ATOH8Q96SQ7 321 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 INSM2Q96T92 566 aaPredicted RBP13.08□□□□□ -0.32
NPC1-201ENST00000269228 FAM129BQ96TA1 746 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 LRIT1Q9P2V4 623 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 A6NCN8 305 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 PLD2O14939 933 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 CDC40O60508 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
NPC1-201ENST00000269228 B4GALT3O60512 393 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 PSIP1O75475 530 aaKnown RBP13.07□□□□□ -0.32
NPC1-201ENST00000269228 WBP4O75554 376 aaKnown RBP13.07□□□□□ -0.32
NPC1-201ENST00000269228 MMP12P39900 470 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 CES4AQ5XG92 561 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 IKBIPQ70UQ0 350 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 HDDC2Q7Z4H3 204 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 OR5L2Q8NGL0 311 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 SERINC2Q96SA4 455 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 SNTG1Q9NSN8 517 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 ZNF451Q9Y4E5 1061 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
NPC1-201ENST00000269228 C11orf98E9PRG8 122 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 SNPHO15079 494 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 SERPINA3P01011 423 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 IFNA6P05013 189 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 AZGP1P25311 298 aaKnown RBP13.07□□□□□ -0.32
NPC1-201ENST00000269228 RORAP35398 523 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 SLC9A3P48764 834 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 WSCD2Q2TBF2 565 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 RBM48Q5RL73 367 aaKnown RBP13.07□□□□□ -0.32
NPC1-201ENST00000269228 SPATC1Q76KD6 591 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 NKD1Q969G9 470 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 FBXL20Q96IG2 436 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 TMEM168Q9H0V1 697 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 EHD1Q9H4M9 534 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 SGK494L7N484 410 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 POLR1CO15160 346 aaPredicted RBP13.07□□□□□ -0.32
NPC1-201ENST00000269228 ITGA3P26006 1051 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 FCHO2Q0JRZ9 810 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 LIN54Q6MZP7 749 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 ARL9Q6T311 187 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 OR51A7Q8NH64 312 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 THEM6Q8WUY1 208 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 WDR12Q9GZL7 423 aaKnown RBP13.07□□□□□ -0.32
NPC1-201ENST00000269228 BRF2Q9HAW0 419 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 DNAJC27Q9NZQ0 273 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 PCDHB14Q9Y5E9 798 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 TFECO14948 347 aaPredicted RBP13.07□□□□□ -0.32
NPC1-201ENST00000269228 HBQ1P09105 142 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 CD36P16671 472 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 CAPN3P20807 821 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 GABRB3P28472 473 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 HSD11B1P28845 292 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 MLLT10P55197 1068 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms