RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 NPIPA5E9PKD4 350 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 RPP14O95059 124 aaKnown RBP14.71□□□□□ -0.05
TIMP3-201ENST00000266085 SNTA1Q13424 505 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 TNFAIP8L3Q5GJ75 292 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 PDZD3Q86UT5 571 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 KLHL31Q9H511 634 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 SOX17Q9H6I2 414 aaPredicted RBP14.71□□□□□ -0.05
TIMP3-201ENST00000266085 NPIPA1Q9UND3 350 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 NUMBLQ9Y6R0 609 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 J3QLW9 94 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 HCRTR2O43614 444 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 PLGP00747 810 aaPredicted RBP14.71□□□□□ -0.05
TIMP3-201ENST00000266085 ZNF19P17023 458 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 INHBCP55103 352 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 FCHO2Q0JRZ9 810 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 SHHQ15465 462 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 MAPK14Q16539 360 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 CARTPTQ16568 116 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 SLC36A4Q6YBV0 504 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 LINC01599Q8WXQ3 324 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 FATE1Q969F0 183 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 NKD1Q969G9 470 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 ZNF451Q9Y4E5 1061 aa14.71□□□□□ -0.05
TIMP3-201ENST00000266085 HPRP00739 348 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 TAS2R38P59533 333 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 TSPAN5P62079 268 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 TUBA3CQ13748 450 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 DSG2Q14126 1118 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 NDUFAF5Q5TEU4 345 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 ZSWIM9Q86XI8 627 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 OR52N2Q8NGI0 321 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 GNPDA2Q8TDQ7 276 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 THAP3Q8WTV1 239 aaPredicted RBP14.71□□□□□ -0.06
TIMP3-201ENST00000266085 OMA1Q96E52 524 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 TMEM80Q96HE8 168 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 HIST1H2AAQ96QV6 131 aa14.71□□□□□ -0.06
TIMP3-201ENST00000266085 IGLV3-10A0A075B6K4 115 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 XPNPEP2O43895 674 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 RHCEP18577 417 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 EDNRAP25101 427 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 GABRB3P28472 473 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 ADAM8P78325 824 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 MC1RQ01726 317 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 UGT3A2Q3SY77 523 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 ZFP69Q49AA0 526 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 C6orf141Q5SZD1 244 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 RFLNAQ6ZTI6 216 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 UBE2J2Q8N2K1 259 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 OR52P1PQ8NH57 321 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 PELI2Q9HAT8 420 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 TMEM45AQ9NWC5 275 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 AK1P00568 194 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 HK1P19367 917 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 PGFP49763 221 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 CLCN2P51788 898 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 TUBA1BP68363 451 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 SHC2P98077 582 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 GRM7Q14831 915 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 IRF4Q15306 451 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 LPAL2Q16609 132 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 GTDC1Q4AE62 458 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 OLFML2AQ68BL7 652 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 TUBA1AQ71U36 451 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.7□□□□□ -0.06
TIMP3-201ENST00000266085 C1orf216Q8TAB5 229 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 HSPBAP1Q96EW2 488 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 ZFYVE21Q9BQ24 234 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 ITGB1BP2Q9UKP3 347 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 PCDHB14Q9Y5E9 798 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 BRWD1Q9NSI6 2320 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 HYKKA2RU49 373 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 ZNF879B4DU55 563 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 GGT1P19440 569 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 AOAHP28039 575 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 SLC3A1Q07837 685 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 EXOC3L2Q2M3D2 409 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 ZNF554Q86TJ5 538 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 C7orf57Q8NEG2 295 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 OR6N1Q8NGY5 312 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 WFDC5Q8TCV5 224 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 TMEM234Q8WY98 164 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 PEX11GQ96HA9 241 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 NTMT1Q9BV86 223 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 BRF2Q9HAW0 419 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 GRHPRQ9UBQ7 328 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 MROH6A6NGR9 719 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 VILLO15195 856 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 PRLP01236 227 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 C1SP09871 688 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 ACSL1P33121 698 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 CXCL12P48061 93 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 SLC9A3P48764 834 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 ST3GAL4Q11206 333 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 YIPF7Q8N8F6 280 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 RBP7Q96R05 134 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 MAGIXQ9H6Y5 334 aa14.7□□□□□ -0.06
TIMP3-201ENST00000266085 A0A1W2PRQ8 180 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ZNF670-ZNF695F2Z2N8 137 aa14.69□□□□□ -0.06
TIMP3-201ENST00000266085 SOX1O00570 391 aaPredicted RBP14.69□□□□□ -0.06
TIMP3-201ENST00000266085 ORC5O43913 435 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms