RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CIDECQ96AQ7 238 aaPredicted RBP13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 CRELD1Q96HD1 420 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 GABARAPL3Q9BY60 117 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC29A3Q9BZD2 475 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 ANKRA2Q9H9E1 313 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 RBFOX1Q9NWB1 397 aaKnown RBP13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 TVP23BQ9NYZ1 205 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 PRAMEF25A6NGN4 478 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 GCM2O75603 506 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 GDI2P50395 445 aaKnown RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 GBX2P52951 348 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SCARB2Q14108 478 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 DSG2Q14126 1118 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 PLAG1Q6DJT9 500 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SHFQ7M4L6 423 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 METTL3Q86U44 580 aaKnown RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 HJURPQ8NCD3 748 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 GPR26Q8NDV2 337 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 CSGALNACT1Q8TDX6 532 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 ZBED6CLQ96FA7 236 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 ZIC5Q96T25 663 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF624Q9P2J8 865 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 ELF5Q9UKW6 265 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 ANKRD36A6QL64 1941 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 A0A1W2PPL8 197 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SCN2BO60939 215 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SCRN3Q0VDG4 424 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 ATP13A5Q4VNC0 1218 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 FRMPD2BQ6IN97 320 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 BEST4Q8NFU0 473 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 DNAJB8Q8NHS0 232 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 ASZ1Q8WWH4 475 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SGK2Q9HBY8 427 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 POLMQ9NP87 494 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 DNAJC11Q9NVH1 559 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SPIN1Q9Y657 262 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 A0A1B0GVC2 190 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 C2orf78A6NCI8 922 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 A6NIN4 97 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 E7EQ34 232 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 GAPDHSO14556 408 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 CD160O95971 181 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 AOAHP28039 575 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SDC2P34741 201 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 HBA1P69905 142 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 DEFA5Q01523 94 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 P2RY14Q15391 338 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 RPS26P11Q5JNZ5 115 aaPredicted RBP13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 DEF8Q6ZN54 512 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 NPAS3Q8IXF0 933 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SYNPOQ8N3V7 929 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 DENND6BQ8NEG7 585 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 FANK1Q8TC84 345 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC16A10Q8TF71 515 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC35A5Q9BS91 424 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 CHIAQ9BZP6 476 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 HPF1Q9NWY4 346 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 ENOPH1Q9UHY7 261 aa13.49□□□□□ -0.25
PCDHB3-201ENST00000231130 PTPRDP23468 1912 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 CHURC1-FNTBB4DL54 471 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 MRPS14O60783 128 aaKnown RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 CSO75390 466 aaKnown RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 GLAP06280 429 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 LHCGRP22888 699 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 F8A1P23610 371 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 PBLDP30039 288 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 RPS7P62081 194 aaKnown RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 B3GLCTQ6Y288 498 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 COQ8AQ8NI60 647 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 WFDC5Q8TCV5 224 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 NMNAT1Q9HAN9 279 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 PLCXD1Q9NUJ7 323 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 MAB21L2Q9Y586 359 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 TRAV20A0A0B4J274 112 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 TRBC2A0A5B9 178 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 MTMR11A4FU01 709 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC35F4A4IF30 521 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 H3BNC9 293 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 TLX2O43763 284 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 PAHP00439 452 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 CFDP00746 253 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 CSKP41240 450 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 MEF2AQ02078 507 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 CRYZQ08257 329 aaKnown RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 COL9A2Q14055 689 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 OR2G6Q5TZ20 316 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 CASP12Q6UXS9 341 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 COQ10AQ96MF6 247 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 NKIRAS2Q9NYR9 191 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 SNX11Q9Y5W9 270 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 A0A1B0GVM2 712 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 TLR4O00206 839 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 SIGLEC5O15389 551 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 COCHO43405 550 aa13.48□□□□□ -0.25
PCDHB3-201ENST00000231130 ACSM4P0C7M7 580 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms