RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 NPAS2Q99743 824 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 KCNK13Q9HB14 408 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 MMP25Q9NPA2 562 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 ADAP2Q9NPF8 381 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 FAM208BQ5VWN6 2430 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 C17orf105B2RV13 164 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 ERAL1O75616 437 aaKnown RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 DDAH2O95865 285 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 KITP10721 976 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 ALOX15P16050 662 aaPredicted RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 PIK3R1P27986 724 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 FEN1P39748 380 aaKnown RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 HK2P52789 917 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 RPL38P63173 70 aaKnown RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 ELAVL1Q15717 326 aaKnown RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 EXT1Q16394 746 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 LACTB2Q53H82 288 aaPredicted RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 AGAP7PQ5VUJ5 663 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 ATG16L1Q676U5 607 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 FAM71E1Q6IPT2 247 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 H3F3CQ6NXT2 135 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 B3GNT7Q8NFL0 401 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 FAM76AQ8TAV0 307 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 RAB3IL1Q8TBN0 382 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 NUDT8Q8WV74 236 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 NCLNQ969V3 563 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 C19orf60Q96EN9 201 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 CNRIP1Q96F85 164 aaPredicted RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 RBM18Q96H35 190 aaKnown RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 AGAP4Q96P64 663 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 DGAT2Q96PD7 388 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 ACBD3Q9H3P7 528 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 MARCOQ9UEW3 520 aaPredicted RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 PPIEQ9UNP9 301 aaKnown RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 CLCA3PQ9Y6N3 262 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 CROCCQ5TZA2 2017 aa13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 TLN1Q9Y490 2541 aaKnown RBP13.43□□□□□ -0.26
SUPT4H1-201ENST00000225504 KLF11O14901 512 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 PRKNO60260 465 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 C1QL1O75973 258 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 SLC35E2P0CK97 266 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 SFTPCP11686 197 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 BCKDHAP12694 445 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 DRD2P14416 443 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 SDC1P18827 310 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 ZNF763Q0D2J5 394 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 NFATC3Q12968 1075 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 VWA5B1Q5TIE3 1220 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 JMJD6Q6NYC1 403 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 WDR75Q8IWA0 830 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 TRIM42Q8IWZ5 723 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 ST13P4Q8IZP2 240 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 TMEM132CQ8N3T6 1108 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 CLHC1Q8NHS4 586 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 GFM2Q969S9 779 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 TUBGCP3Q96CW5 907 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 METTL2AQ96IZ6 378 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 PPP3R2Q96LZ3 170 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 ZNF681Q96N22 645 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 C1orf50Q9BV19 199 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 FAIM2Q9BWQ8 316 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 NUF2Q9BZD4 464 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 OR8D2Q9GZM6 311 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 LIN28AQ9H9Z2 209 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 MYNNQ9NPC7 610 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 SLCO1B3Q9NPD5 702 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 INTS9Q9NV88 658 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 PLA2G3Q9NZ20 509 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 CSAG2Q9Y5P2 127 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 KALRNO60229 2985 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 AKAP10O43572 662 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 SNUPNO95149 360 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 F10P00742 488 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 CT62P0C5K7 136 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 CPMP14384 443 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 SOX18P35713 384 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 SOX11P35716 441 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 ZNF267Q14586 743 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 TERF2Q15554 542 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 IRAK1BP1Q5VVH5 260 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 ISLR2Q6UXK2 745 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 C16orf47Q6ZP98 133 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 CRLF3Q8IUI8 442 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 RBMXL3Q8N7X1 1067 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 MORN4Q8NDC4 146 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 SLC2A12Q8TD20 617 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 ZNF721Q8TF20 911 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 THAP3Q8WTV1 239 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 EXOSC8Q96B26 276 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 KLHL29Q96CT2 875 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 SENP5Q96HI0 755 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 TSSK3Q96PN8 268 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 MFRPQ9BY79 579 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 CDCP1Q9H5V8 836 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 STMN3Q9NZ72 180 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 UTS2RQ9UKP6 389 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 ZNF451Q9Y4E5 1061 aa13.42□□□□□ -0.26
SUPT4H1-201ENST00000225504 TRBV11-1A0A0K0K1C0 115 aa13.41□□□□□ -0.26
SUPT4H1-201ENST00000225504 OR10H2O60403 315 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms