RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 OLFM2O95897 454 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 TSPAN19P0C672 248 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 C1GALT1C1LP0DN25 315 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 PRKCAP17252 672 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 APEX1P27695 318 aaKnown RBP13.33□□□□□ -0.28
USH1C-201ENST00000005226 GPC1P35052 558 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 GSTM5P46439 218 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 RPS25P62851 125 aaKnown RBP13.33□□□□□ -0.28
USH1C-201ENST00000005226 ZNF33BQ06732 778 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 SCN1BQ07699 218 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 ACSM5Q6NUN0 579 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 HTR3DQ70Z44 454 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 SLC7A13Q8TCU3 470 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 BTN2A2Q8WVV5 523 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 C17orf50Q8WW18 174 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 GATAD2BQ8WXI9 593 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 C1GALT1C1Q96EU7 318 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 TRAV19A0A0A6YYK7 116 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 PLA2G10O15496 165 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 SCO2O43819 266 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 ATG13O75143 517 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 TIMP2P16035 220 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 GALK2Q01415 458 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 ILKQ13418 452 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 PDE7AQ13946 482 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 GRIN2CQ14957 1233 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 NCF4Q15080 339 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 GLYR1Q49A26 553 aaPredicted RBP13.33□□□□□ -0.28
USH1C-201ENST00000005226 PDZK1Q5T2W1 519 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 PGBD2Q6P3X8 592 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 VN1R5Q7Z5H4 357 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 TP53I13Q8NBR0 393 aaPredicted RBP13.33□□□□□ -0.28
USH1C-201ENST00000005226 SETD6Q8TBK2 473 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 CREB3L4Q8TEY5 395 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 APOBEC4Q8WW27 367 aaKnown RBP13.33□□□□□ -0.28
USH1C-201ENST00000005226 NELL2Q99435 816 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 GPA33Q99795 319 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 MND1Q9BWT6 205 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 NLNQ9BYT8 704 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 NDUFB11Q9NX14 153 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 COMMD3Q9UBI1 195 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 GPR52Q9Y2T5 361 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 DYRK1BQ9Y463 629 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 PRKAB1Q9Y478 270 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 A8MVJ9 347 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 SMLR1H3BR10 107 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 MYL9P24844 172 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 VIPR1P32241 457 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 DGKGP49619 791 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 SNRPGP62308 76 aaKnown RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 HEPACAMQ14CZ8 416 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.32□□□□□ -0.28
USH1C-201ENST00000005226 CCDC58Q4VC31 144 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 TPGS2Q68CL5 300 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 NOXA1Q86UR1 476 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 CADM2Q8N3J6 435 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 OR52I1Q8NGK6 324 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 MRPS31Q92665 395 aaKnown RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 FOPNLQ96NB1 174 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 CPEB1Q9BZB8 566 aaKnown RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 SEMA3GQ9NS98 782 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 SLC25A13Q9UJS0 675 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 KCND3Q9UK17 655 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 SNX7Q9UNH6 387 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 CLCA3PQ9Y6N3 262 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 A0A0G2JN53 185 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 OR6C70A6NIJ9 312 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 ANHXE9PGG2 379 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 CPNE3O75131 537 aaKnown RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 NCR1O76036 304 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 TP53P04637 393 aaPredicted RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 H1F0P07305 194 aaKnown RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 PIPP12273 146 aaPredicted RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 MAN2A2P49641 1150 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 METAP1P53582 386 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 DBPQ10586 325 aaPredicted RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 NFE2L1Q14494 772 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 INSL4Q14641 139 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 SYPL1Q16563 259 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 GPAT3Q53EU6 434 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 HENMT1Q5T8I9 393 aaKnown RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 SAXO2Q658L1 398 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 TMEM215Q68D42 235 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 ADGRF3Q8IZF5 1079 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 ATP6V1C2Q8NEY4 427 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 TM9SF4Q92544 642 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 GLYATL1Q969I3 302 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 SLC25A46Q96AG3 418 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 METTL2AQ96IZ6 378 aaKnown RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 GDF15Q99988 308 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 SLC46A2Q9BY10 475 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 SLC22A4Q9H015 551 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 KCNK12Q9HB15 430 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 TMEM39AQ9NV64 488 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 NDRG2Q9UN36 371 aaKnown RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 RPL36Q9Y3U8 105 aaKnown RBP13.32□□□□□ -0.28
USH1C-201ENST00000005226 GPSM3Q9Y4H4 160 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 MAU2Q9Y6X3 613 aa13.32□□□□□ -0.28
USH1C-201ENST00000005226 SCN5AQ14524 2016 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms