RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Bcl2a1dO55179 172 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Csn1s2aQ02862 184 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cxcr5Q04683 374 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ccdc138Q0VF22 680 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gpr39Q5U431 456 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vrk1Q80X41 440 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Snx32Q80ZJ7 404 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mettl2Q8BMK1 389 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Naa25Q8BWZ3 972 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pramef8Q8CE24 480 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vmn1r205Q8R276 316 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr569Q8VGZ2 314 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr103Q920Y8 313 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tex19.2Q9D5S1 317 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 SrfQ9JM73 504 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ccdc120A2AEV7 629 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm5861F6VCN9 180 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 4933402N22RikF7D1B3 190 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vmn2r51L7N215 852 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cyp1a2P00186 513 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 AladP10518 330 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 F2P19221 618 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Egfbp2P36368 261 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Kdm4dQ3U2K5 510 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mmp25Q3U435 615 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Plk5Q4FZD7 595 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc23a3Q60850 611 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 ZpbpQ62522 350 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ifit3Q64345 403 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Snx6Q6P8X1 406 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cachd1Q6PDJ1 1288 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Prss54Q7M756 383 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr857Q7TRF7 309 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lrrc8dQ8BGR2 859 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Arel1Q8CHG5 823 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mcoln3Q8R4F0 553 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pcolce2Q8R4W6 414 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Brinp1Q920P3 760 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Trim16Q99PP9 556 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ncbp2Q9CQ49 156 aaKnown RBP9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 CygbQ9CX80 190 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Hspa12bQ9CZJ2 685 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Adck1Q9D0L4 525 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Hcar2Q9EP66 360 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rcan2Q9JHG2 197 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 B3galt5Q9JI67 308 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ap1m2Q9WVP1 423 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Dchs2A0A0A6YW72 3346 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Igkv6-25A0A140T8N7 115 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp300A2AE21 645 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 PpigA2AR02 752 aaKnown RBP9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp964B2RR88 472 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vmn2r105E9Q3A5 860 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Aff2O55112 1272 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cct8P42932 548 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 GlaP51569 419 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Entpd1P55772 510 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Arhgap39P59281 1107 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rab8bP61028 207 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 MplQ08351 625 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Atf7ip2Q3UL97 452 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr798Q7TRH8 311 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Map4k5Q8BPM2 847 aaKnown RBP9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fgd2Q8BY35 655 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc35e2Q8C811 405 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rfpl4aQ8VH31 287 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Dnajc9Q91WN1 259 aaKnown RBP9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cyp4f3Q99N16 524 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cnot11Q9CWN7 505 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Srxn1Q9D975 136 aa9.39□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm13040A2A8C4 496 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vmn1r20K7N778 303 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 NumblO08919 604 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 FkbplO35450 347 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc30a3P97441 388 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tnfrsf8Q60846 498 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pdcd4Q61823 469 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 RalyQ64012 312 aaKnown RBP9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mfsd4aQ6PDC8 510 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Carnmt1Q80UY1 400 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gpr152Q8BXS7 511 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ppwd1Q8CEC6 646 aaKnown RBP9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Snapc1Q8K0S9 389 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tm4sf5Q91XF2 196 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Asb9Q91ZT8 290 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Erv3Q9DAX3 200 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cyp2d22Q9JKY7 500 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 HelzQ6DFV5 1964 aaKnown RBP9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp407G3UVV3 2246 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tyw5A2RSX7 315 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 TmppeD3Z286 447 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rnf148G3X9R7 316 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vmn2r61L7N2B8 865 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 B3galt2O54905 422 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gtf2h4O70422 463 aaKnown RBP9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rps26P62855 115 aaKnown RBP9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Akr1c6P70694 323 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Dlk1Q09163 385 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 B4galnt2Q09199 510 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Clpsl2Q3UW21 102 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms