RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Cdc123Q8CII2 336 aa13.46□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gtpbp8Q9CY28 285 aa13.46□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Fndc8Q9D2H8 321 aa13.46□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Actr6Q9D864 396 aa13.46□□□□□ -0.26
Col3a1-201ENSMUST00000087883 1700034I23RikQ9D9Q3 184 aa13.46□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Tmprss6Q9DBI0 811 aa13.46□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Pdzk1Q9JIL4 519 aa13.46□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Ttc39aA2ACP1 578 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Zfp715G3X9T1 886 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Myf6P15375 242 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gm8332Q3UTA4 144 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Znf354cQ571J5 560 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Olfr1385Q7TQT1 309 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Zc3hav1lQ8BFR1 296 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Eif5a2Q8BGY2 153 aaKnown RBP13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Rab39aQ8BHD0 217 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Arhgap19Q8BRH3 494 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Shisa4Q8CA71 197 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Lrrc20Q8CI70 184 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Mthfd1Q922D8 935 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 NagaQ9QWR8 415 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 PrebQ9WUQ2 417 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Olfr671A0A1B0GSN5 317 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gm3854A0A1B0GSS6 495 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gm21560D3Z7A4 205 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gm3138K7N754 218 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Zp2P20239 713 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Rpl10lP86048 214 aaKnown RBP13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gtpbp2Q3UJK4 602 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Dusp16Q6PCP3 660 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Rpl10Q6ZWV3 214 aaKnown RBP13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Tas2r140Q7TQA4 312 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Olfr1101Q7TR59 310 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Cox15Q8BJ03 413 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Arf2Q8BSL7 181 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 BC024139Q8BVJ3 772 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Dnajc27Q8CFP6 273 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Olfr53Q8VGL8 312 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Asb8Q91ZT9 288 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Scgb3a1Q920D7 104 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Zdhhc13Q9CWU2 622 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Eral1Q9CZU4 437 aaKnown RBP13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Clcf1Q9QZM3 225 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Rimbp3Q3V0F0 1606 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Olfr727A2RTN7 324 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Cyp4a31F8WGU9 509 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Mtnd5P03921 607 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Zfp14P10755 501 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Rln1P47932 185 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Ces2bQ6PDB7 556 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Cdh7Q8BM92 785 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Fastkd3Q8BSN9 661 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Spp2Q8K1I3 203 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Rbm12Q8R4X3 992 aaKnown RBP13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Olfr651Q8VG78 313 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Usb1Q91W78 267 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 MmabQ9D273 237 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Rsc1a1Q9ER99 582 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 PnckQ9QYK9 343 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Klhdc7bA0A286YD60 1263 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Kcnk3O35111 409 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Kcnj9P48543 393 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 S100a11P50543 98 aaKnown RBP13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Cdk10Q3UMM4 360 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Tex10Q3URQ0 928 aaKnown RBP13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gal3st4Q3V1B8 480 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Ankrd37Q569N2 159 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gm11992Q5SS90 291 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gpr62Q80UC6 358 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Prickle2Q80Y24 845 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Slitrk5Q810B7 957 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Ofcc1Q8BGX4 166 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Cstf2tQ8C7E9 632 aaKnown RBP13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Tmem150cQ8C8S3 249 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Unc50Q9CQ61 259 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Trem1Q9JKE2 230 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Mapk3Q63844 380 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 B3gnt5Q8BGY6 376 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Slc15a3Q8BPX9 578 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Fam78aQ8C552 283 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Bcas3Q8CCN5 928 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Q9CWU4 180 aaKnown RBP13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Zfp869Q9DC47 529 aa13.45□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Irs2P81122 1321 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Cd163l1A0A1B0GSB0 991 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Ssxa1B1AUS7 101 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Ugt2b17P17717 530 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Cfap97Q6ZPR1 541 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 IpmkQ7TT16 396 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Frs2Q8C180 508 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Mtfr2Q8VED8 361 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Socs7Q8VHQ2 579 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Q8WUR0 141 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Cntn6Q9JMB8 1028 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Col14a1Q80X19 1797 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Nhsl2B1AXH1 854 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Rnpepl1G5E872 720 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Mtx2O88441 263 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Kcnab3P97382 249 aa13.44□□□□□ -0.26
Col3a1-201ENSMUST00000087883 Gas6Q61592 674 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms