RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Subh2bvQ9D9Z7 123 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ate1Q9Z2A5 516 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Omt2aF6ZJR3 104 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm10715J3QP74 227 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 CfpP11680 464 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 BdnfP21237 249 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Apcdd1Q3U128 514 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc5a6Q5U4D8 634 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Hyal5Q812F3 526 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Poglut1Q8BYB9 392 aaKnown RBP11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr818Q8VG46 318 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Inpp5eQ9JII1 647 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr640E9Q7P5 314 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Zfp619G3X9T2 1161 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rab11fip2G3XA57 512 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr6P34986 316 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Stx4P70452 298 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nol9Q3TZX8 714 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Smu1Q3UKJ7 513 aaKnown RBP11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Znf276Q8CE64 614 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr448Q8VES9 310 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nt5c1bQ91YE9 573 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Mrgpra5Q91ZC7 304 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Atoh8Q99NA2 322 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Xkr6E9Q6C8 638 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gcm2O09102 504 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nos3P70313 1202 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tm9sf4Q8BH24 643 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Lin52Q8CD94 116 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nprl3Q8VIJ8 569 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Prdm9Q96EQ9 843 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ppp6cQ9CQR6 305 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cxxc1Q9CWW7 660 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tmed10Q9D1D4 219 aaKnown RBP11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 B3galt5Q9JI67 308 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 CcniQ9Z2V9 377 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Megf6Q80V70 1572 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Grk6O70293 576 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Clcn7O70496 803 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cacng1O70578 223 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rps6ka3P18654 740 aaKnown RBP11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nsg2P47759 171 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc30a3P97441 388 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Sox14Q04892 240 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 A1bgQ19LI2 512 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pnliprp1Q5BKQ4 473 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Adamtsl2Q7TSK7 957 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cd209eQ91ZW7 208 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 EcdQ9CS74 641 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 D10Wsu102eQ9CX66 185 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Plek2Q9WV52 353 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm13283A0A087WPG5 182 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vmn2r101E9PZS9 857 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 IduaP48441 634 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Zfp935Q14DI0 353 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Fahd2Q3TC72 313 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Mocs1Q5RKZ7 636 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ostf1Q62422 215 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nfatc4Q8K120 901 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Fbxl20Q9CZV8 436 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Zswim8Q3UHH1 1832 aaKnown RBP11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Zfp646Q6NV66 1788 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 1700028J19RikA0A0U1RP08 172 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm20547B8JJN0 1276 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ackr2O08707 378 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 P01807 119 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 CfbP04186 761 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tmco2P0C1V4 183 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ybx1P62960 322 aaKnown RBP11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Arhgap9Q1HDU4 648 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 OgnQ62000 298 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Znf451Q8C0P7 1056 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ubqln1Q8R317 582 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gnpda2Q9CRC9 276 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Dgat1Q9Z2A7 498 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Smim22J3QP37 91 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cyp1a2P00186 513 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Itih2Q61703 946 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tex13c3Q810P0 219 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Kcnk10Q8BUW1 535 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cox10Q8CFY5 443 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Znf628Q8CJ78 1038 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rhbdl1Q8VC82 373 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr986Q8VFN6 312 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Htra3Q9D236 459 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Scamp4Q9JKV5 230 aa11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Togaram1Q6A070 1776 aaKnown RBP11.35□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm11634A0A1B0GSX1 172 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 GmlE9PX31 176 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm5145F8VQ88 278 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tcn2O88968 430 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Adra2bP30545 450 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 GuloP58710 440 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 SmsP97355 366 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 IspdQ5RJG7 447 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 NnatQ61979 81 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Frs2Q8C180 508 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rfwd3Q8CIK8 774 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Mchr1Q8JZL2 353 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vmn1r84Q8R284 318 aa11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms