RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TRBC2A0A5B9 178 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 SEMG1P04279 462 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF30P17039 623 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 AMD1P17707 334 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 ETV3P41162 512 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 DCDC1P59894 354 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 MEF2AQ02078 507 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-227ENST00000640957 MLLT1Q03111 559 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-227ENST00000640957 USP45Q70EL2 814 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 UBE2R2Q712K3 238 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-227ENST00000640957 KLHL6Q8WZ60 621 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 SENP5Q96HI0 755 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-227ENST00000640957 RAD9AQ99638 391 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-227ENST00000640957 GPATCH2Q9NW75 528 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 ARID1AO14497 2285 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 CEP290O15078 2479 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-227ENST00000640957 SHOXO15266 292 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 PLATP00750 562 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 EBLN1P0CF75 366 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 ANXA8P13928 327 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 AKR1D1P51857 326 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 HBA1P69905 142 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 FABP5Q01469 135 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF177Q13360 481 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-227ENST00000640957 CHRNA6Q15825 494 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 IFI44LQ53G44 452 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 XKR6Q5GH73 641 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 IDNKQ5T6J7 187 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 CPTPQ5TA50 214 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 ARSKQ6UWY0 536 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 CASP12Q6UXS9 341 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 TSPAN33Q86UF1 283 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 C2orf73Q8N5S3 287 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-227ENST00000640957 ZBTB2Q8N680 514 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 C11orf65Q8NCR3 313 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 OR11H7Q8NGC8 314 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 TMEM80Q96HE8 168 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 LINC00052Q96N35 136 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 SAMD11Q96NU1 681 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 TBX5Q99593 518 aa13.11□□□□□ -0.31
SCARB2-227ENST00000640957 A0A1W2PPK0 400 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 EEF1E1O43324 174 aaKnown RBP13.1□□□□□ -0.31
SCARB2-227ENST00000640957 ORC5O43913 435 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SCN2BO60939 215 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 GJB5O95377 273 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 ANXA4P09525 319 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-227ENST00000640957 CELP19835 753 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 TACR2P21452 398 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 IRF8Q02556 426 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 TLE2Q04725 743 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 RGS1Q08116 209 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 TNK1Q13470 666 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SCARB2Q14108 478 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 ADGRD2Q7Z7M1 963 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 HJURPQ8NCD3 748 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SUSD3Q96L08 255 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 C5AR2Q9P296 337 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SEC14L4Q9UDX3 406 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 NCKAP1Q9Y2A7 1128 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 PCDHB11Q9Y5F2 797 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 TCRBV16S1A1N1A0A5B0 115 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 MGAT4DA6NG13 374 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 PRKYO43930 277 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 RFPL3O75679 317 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 ANXA5P08758 320 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 NAGAP17050 411 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF7P17097 686 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-227ENST00000640957 CTRB1P17538 263 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 CHI3L1P36222 383 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-227ENST00000640957 CCR6P51684 374 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 C1DQ13901 141 aaKnown RBP13.1□□□□□ -0.31
SCARB2-227ENST00000640957 AANATQ16613 207 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 CTRB2Q6GPI1 263 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 MZT2BQ6NZ67 158 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 CEACAM20Q6UY09 585 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SYNPOQ8N3V7 929 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 LRRC17Q8N6Y2 441 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 OR52E4Q8NGH9 312 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 MARC2Q969Z3 335 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 KCTD7Q96MP8 289 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 CDCA4Q9BXL8 241 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 ABCG5Q9H222 651 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 ERVMER34-1Q9H9K5 563 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 RANBP2P49792 3224 aaKnown RBP13.1□□□□□ -0.31
SCARB2-227ENST00000640957 HYKKA2RU49 373 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 MPC2O95563 127 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 GSTM5P46439 218 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 MFSD13AQ14CX5 517 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 TTLL9Q3SXZ7 439 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 KLHL22Q53GT1 634 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF385BQ569K4 471 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 FAM27D1Q5T7N8 215 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 RNF219Q5W0B1 726 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-227ENST00000640957 FRG2Q64ET8 278 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SERPINA13PQ6UXR4 307 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SERINC5Q86VE9 423 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 LRRTM4Q86VH4 590 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms