RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 FLYWCH1Q4VC44 716 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 SLC36A4Q6YBV0 504 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 LRRC25Q8N386 305 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-223ENST00000640640 OR8J1Q8NGP2 316 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 ISL2Q96A47 359 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 JSRP1Q96MG2 331 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-223ENST00000640640 SLC35C2Q9NQQ7 365 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 MARK1Q9P0L2 795 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 HIDE1A8MVS5 230 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 TLX3O43711 291 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-223ENST00000640640 GPR37L1O60883 481 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 CDRT1O95170 752 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 MAP2K4P45985 399 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 ELOCQ15369 112 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 MLIPQ5VWP3 458 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 ZSWIM9Q86XI8 627 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 TMED9Q9BVK6 235 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 KCNJ13O60928 360 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 PGFP49763 221 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 CRISP1P54107 249 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 NDUFAF5Q5TEU4 345 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 ZNF675Q8TD23 568 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 ECHDC3Q96DC8 303 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 TMEM184CQ9NVA4 438 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 SMCHD1A6NHR9 2005 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 LAMB2P55268 1798 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-223ENST00000640640 WASH3PC4AMC7 463 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 SLC1A7O00341 560 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 LSM1O15116 133 aaKnown RBP16.79■□□□□ 0.28
SCARB2-223ENST00000640640 IFNA6P05013 189 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 CYP17A1P05093 508 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 TACSTD2P09758 323 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 CD72P21854 359 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 GABRA3P34903 492 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 OR52E8Q6IFG1 317 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 PROKR2Q8NFJ6 384 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 OR2A12Q8NGT7 310 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 RNASE11Q8TAA1 199 aaKnown RBP16.79■□□□□ 0.28
SCARB2-223ENST00000640640 EPYCQ99645 322 aa16.79■□□□□ 0.28
SCARB2-223ENST00000640640 PAK6Q9NQU5 681 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-223ENST00000640640 CCRL2O00421 344 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 ABLIM3O94929 683 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 PDHA2P29803 388 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 RUNDC3AQ59EK9 446 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 RETREG3Q86VR2 466 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 GNPDA2Q8TDQ7 276 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 FRS2Q8WU20 508 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 PRTFDC1Q9NRG1 225 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 SERTAD3Q9UJW9 196 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 TCRBV3S1A0A5B6 114 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 SLC15A1P46059 708 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 TAS2R38P59533 333 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 AP3S2P59780 193 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 DSG2Q14126 1118 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 RTL10Q7L3V2 364 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 MAVSQ7Z434 540 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 NANOGNBQ7Z5D8 188 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 ZNF480Q8WV37 535 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 GATA6Q92908 595 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 OMA1Q96E52 524 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 NKX2-4Q9H2Z4 354 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-223ENST00000640640 DNMT3BQ9UBC3 853 aaKnown RBP16.78■□□□□ 0.28
SCARB2-223ENST00000640640 J3QLW9 94 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 MITFO75030 526 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-223ENST00000640640 PRLP01236 227 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 ZNF19P17023 458 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 DUS1LQ6P1R4 473 aaKnown RBP16.78■□□□□ 0.28
SCARB2-223ENST00000640640 TUBA3EQ6PEY2 450 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 TSPYL5Q86VY4 417 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-223ENST00000640640 ABCA3Q99758 1704 aa16.78■□□□□ 0.28
SCARB2-223ENST00000640640 OR52A4PA6NMU1 304 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 BLOC1S5-TXNDC5H3BN57 136 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 FBP2O00757 339 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 ORC5O43913 435 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 TNFRSF1BP20333 461 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 PPP3R1P63098 170 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 SIM1P81133 766 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-223ENST00000640640 CSTF1Q05048 431 aaKnown RBP16.77■□□□□ 0.28
SCARB2-223ENST00000640640 SLC3A1Q07837 685 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 CD47Q08722 323 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 COL9A2Q14055 689 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-223ENST00000640640 VEZF1Q14119 521 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 UAP1L1Q3KQV9 507 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 PAMR1Q6UXH9 720 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 OR4N5Q8IXE1 308 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 SLC22A15Q8IZD6 547 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 CSNK1A1LQ8N752 337 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 PLA2G15Q8NCC3 412 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 CHST4Q8NCG5 386 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 OR52P1PQ8NH57 321 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 PLEKHA1Q9HB21 404 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 SLAMF8Q9P0V8 285 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 ENPP4Q9Y6X5 453 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 LOXHD1Q8IVV2 1947 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 AREL1O15033 823 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 ERVFC1P60507 584 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 PTCHD1Q96NR3 888 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 NECTIN4Q96NY8 510 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms