RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 MSLNLQ96KJ4 702 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 FRMD6Q96NE9 622 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 NELL2Q99435 816 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 SORBS1Q9BX66 1292 aaKnown RBP14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 MAPRE3Q9UPY8 281 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 CARD8Q9Y2G2 431 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 KIAA1671Q9BY89 1806 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 A0A1W2PRB8 838 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 MYL12BO14950 172 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 CPNE3O75131 537 aaKnown RBP14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 LATS1O95835 1130 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 ALPPP05187 535 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 BCHEP06276 602 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 KLK1P06870 262 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 TSPAN19P0C672 248 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 PBLDP30039 288 aaPredicted RBP14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 SDC2P34741 201 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 ETV5P41161 510 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 ETV1P50549 477 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 GNG2P59768 71 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 DSTNP60981 165 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 MLLT11Q13015 90 aaPredicted RBP14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 ILKQ13418 452 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 EFR3AQ14156 821 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 SLBPQ14493 270 aaKnown RBP eCLIP14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 MFSD4BQ5TF39 518 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 XKRXQ6PP77 449 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 USP30Q70CQ3 517 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 PCSK9Q8NBP7 692 aaKnown RBP14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 PROKR2Q8NFJ6 384 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 OR4D11Q8NGI4 311 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 ZNF461Q8TAF7 563 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 CXorf36Q9H7Y0 433 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 ACOXLQ9NUZ1 547 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 TVP23BQ9NYZ1 205 aa14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 DNMT3AQ9Y6K1 912 aaPredicted RBP14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 PRRC2BQ5JSZ5 2229 aaKnown RBP14.39□□□□□ -0.11
PCDHGB1-202ENST00000611598 OR6C70A6NIJ9 312 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 PRKYO43930 277 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 TNNI3P19429 210 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 CST5P28325 142 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 ETV3P41162 512 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 ARPC4P59998 168 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 ATAT1Q5SQI0 421 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 FAM71E1Q6IPT2 247 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 KIAA1841Q6NSI8 718 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 TCTN3Q6NUS6 607 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 CASP12Q6UXS9 341 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 DEF8Q6ZN54 512 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 GALNT6Q8NCL4 622 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 NLGN4YQ8NFZ3 816 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 TRMT2BQ96GJ1 504 aaKnown RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 DHRS1Q96LJ7 313 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 RIPOR3Q96MK2 946 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 MCOLN1Q9GZU1 580 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 NDOR1Q9UHB4 597 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 TMCC3Q9ULS5 477 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 NDRG2Q9UN36 371 aaKnown RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 RPL36Q9Y3U8 105 aaKnown RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 KCNE2Q9Y6J6 123 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 A0A0X1KG70 313 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 TLX2O43763 284 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 CATP04040 527 aaKnown RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 IL3P08700 152 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 TBPL1P62380 186 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 LSM11P83369 360 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 CAP1Q01518 475 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 MPPE1Q53F39 396 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 OR2G6Q5TZ20 316 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 REEP3Q6NUK4 255 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 ERAP2Q6P179 960 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 Q6ZVU0 165 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 CMTM8Q8IZV2 173 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 HORMAD2Q8N7B1 307 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 TP53I13Q8NBR0 393 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 ATP6V1C2Q8NEY4 427 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 SLC38A5Q8WUX1 472 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 TMEM159Q96B96 161 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 SLC6A16Q9GZN6 736 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 POLR2J3Q9H1A7 115 aaKnown RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 IRF2BPLQ9H1B7 796 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 FAM83DQ9H4H8 585 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 ELAC1Q9H777 363 aaKnown RBP14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 DMRT3Q9NQL9 472 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 MALT1Q9UDY8 824 aa14.38□□□□□ -0.11
PCDHGB1-202ENST00000611598 POLR1CO15160 346 aaPredicted RBP14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 IL1AP01583 271 aa14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 APEX1P27695 318 aaKnown RBP14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 MLLT3P42568 568 aaPredicted RBP14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 ATN1P54259 1190 aaPredicted RBP14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 RPS25P62851 125 aaKnown RBP14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 C1DQ13901 141 aaKnown RBP14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 HEPACAMQ14CZ8 416 aa14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 PGBD2Q6P3X8 592 aa14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 SYCE2Q6PIF2 218 aa14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 NPAS4Q8IUM7 802 aa14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 YIPF7Q8N8F6 280 aa14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 RASGEF1AQ8N9B8 481 aa14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 ZNF740Q8NDX6 193 aa14.37□□□□□ -0.11
PCDHGB1-202ENST00000611598 OR52I1Q8NGK6 324 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms