RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	RBM12B	Q8IXT5	1001 aa	Known RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	ASCC1	Q8N9N2	400 aa	Known RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	OR4K5	Q8NGD3	323 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	OR5D16	Q8NGK9	328 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	OR8K5	Q8NH50	307 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	HEBP1	Q9NRV9	189 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	STOX2	Q9P2F5	926 aa	Predicted RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571		A0A1W2PQL4	384 aa	Predicted RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	INMT-MINDY4	F8WBC2	141 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	SCAMP2	O15127	329 aa	Known RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	ATF6	P18850	670 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	IGFBP4	P22692	258 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	VIPR2	P41587	438 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	SOX2	P48431	317 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	BTBD16	Q32M84	506 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	MYEOV	Q96EZ4	313 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	ZNF354B	Q96LW1	612 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	SLC12A9	Q9BXP2	914 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	CCDC59	Q9P031	241 aa	Known RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	MARK1	Q9P0L2	795 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	CARD8	Q9Y2G2	431 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	CACNA1I	Q9P0X4	2223 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	TRIM64C	A6NLI5	447 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	REM1	O75628	298 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	DDX6	P26196	483 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	ALDH3B2	P48448	385 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	OR12D2	P58182	307 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	TBC1D25	Q3MII6	688 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	TOR1AIP1	Q5JTV8	583 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	B3GLCT	Q6Y288	498 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	TOMM5	Q8N4H5	51 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	ACOT13	Q9NPJ3	140 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	CNIH4	Q9P003	139 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	CABIN1	Q9Y6J0	2220 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571		A6NL46	340 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	DRGX	A6NNA5	263 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	MCIDAS	D6RGH6	385 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	FXYD1	O00168	92 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	PROM1	O43490	865 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	ADH5	P11766	374 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	ZNF30	P17039	623 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	CAV3	P56539	151 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	PTGES3	Q15185	160 aa	Known RBP	13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	CPZ	Q66K79	652 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	ADNP2	Q6IQ32	1131 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	OLIG3	Q7RTU3	272 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	OAF	Q86UD1	273 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	ZNF740	Q8NDX6	193 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	LRRC20	Q8TCA0	184 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	IKZF5	Q9H5V7	419 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	HCN2	Q9UL51	889 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	ARNTL	O00327	626 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	TFPI	P10646	304 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	BMP4	P12644	408 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	PYCR1	P32322	319 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	MAN2A2	P49641	1150 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	STXBP1	P61764	594 aa	Known RBP	13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	DEFB134	Q4QY38	66 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	SLC27A4	Q6P1M0	643 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	TMEM107	Q6UX40	140 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	OR8J1	Q8NGP2	316 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	OR13F1	Q8NGS4	319 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	ISL2	Q96A47	359 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	SLC35C2	Q9NQQ7	365 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	WWP2	O00308	870 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	CSF2RA	P15509	400 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	SYN1	P17600	705 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	CD40LG	P29965	261 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	ST3GAL3	Q11203	375 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	SBSN	Q6UWP8	590 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	IKBIP	Q70UQ0	350 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	SPRED1	Q7Z699	444 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	GATS	Q8NAP1	163 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	RHNO1	Q9BSD3	238 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	PHF11	Q9UIL8	331 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	OR1A2	Q9Y585	309 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571		A0A1W2PRG6	482 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	HTR3E	A5X5Y0	456 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	DLGAP1	O14490	977 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	EEF1E1	O43324	174 aa	Known RBP	13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	APOD	P05090	189 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	ACADL	P28330	430 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	NAA10	P41227	235 aa	Predicted RBP	13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	DAP	P51397	102 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	SELENOW	P63302	87 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	CBLB	Q13191	982 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	HSD11B1L	Q7Z5J1	315 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	KRT77	Q7Z794	578 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	JAZF1	Q86VZ6	243 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	LNX2	Q8N448	690 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	GRPEL2	Q8TAA5	225 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	SLC25A36	Q96CQ1	311 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	NEUROD4	Q9HD90	331 aa		13.24	□□□□□ -0.29
MUC1-223	ENST00000611571	TBC1D24	Q9ULP9	559 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms