RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PLIN5Q00G26 463 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 CUL3Q13618 768 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 SERTAD2Q14140 314 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 ERCC6LQ2NKX8 1250 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 ZNF750Q32MQ0 723 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 GGTA1PQ4G0N0 100 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 HIST2H2BCQ6DN03 193 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 FAM180BQ6P0A1 224 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 COMMD6Q7Z4G1 85 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 SLC22A9Q8IVM8 553 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 TMEM132CQ8N3T6 1108 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 TMEM156Q8N614 296 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 C1orf52Q8N6N3 182 aaKnown RBP13.48□□□□□ -0.25
HDDC2-204ENST00000608295 OR14A16Q8NHC5 309 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 CDC26Q8NHZ8 85 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 NR4A3Q92570 626 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 EBPLQ9BY08 206 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 GSTO2Q9H4Y5 243 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 MID1IP1Q9NPA3 183 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 ERVK-19Q9WJR5 959 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 FIS1Q9Y3D6 152 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 TSC22D4Q9Y3Q8 395 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 ASB4Q9Y574 426 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 EML6Q6ZMW3 1958 aa13.48□□□□□ -0.25
HDDC2-204ENST00000608295 CROCCQ5TZA2 2017 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 ESPNB1AK53 854 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 G3V2L1 256 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 PGRMC2O15173 223 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 PLIN3O60664 434 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 CDH16O75309 829 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 SPAG7O75391 227 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 OR2J2O76002 312 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 UNC5CO95185 931 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 CD46P15529 392 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 ALOX15P16050 662 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 STT3AP46977 705 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 ALDH9A1P49189 494 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 CYB561P49447 251 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 SSR4P51571 173 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 HK2P52789 917 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 MAPK12P53778 367 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 PRKAA2P54646 552 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 FOXA1P55317 472 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 HMGCS1Q01581 520 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 BTKQ06187 659 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 ZNF267Q14586 743 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 RASA2Q15283 850 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 TERF2Q15554 542 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 CCNYL2Q5T2Q4 361 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 C1QL3Q5VWW1 255 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 MRM1Q6IN84 353 aaKnown RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 ZYG11AQ6WRX3 759 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 SRRM1Q8IYB3 904 aaKnown RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 CYP4Z2PQ8N1L4 340 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 CPSF7Q8N684 471 aaKnown RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 ST6GALNAC3Q8NDV1 305 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 METTL6Q8TCB7 284 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 DAZLQ92904 295 aaKnown RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 GAL3ST4Q96RP7 486 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 SLX1AQ9BQ83 275 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 C1QTNF3Q9BXJ4 246 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 DDX31Q9H8H2 851 aaKnown RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 WDR41Q9HAD4 459 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 COPS7AQ9UBW8 275 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 VTI1BQ9UEU0 232 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 DCDC2Q9UHG0 476 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 ERRFI1Q9UJM3 462 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 ERVK-11Q9UQG0 969 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 USP9XQ93008 2570 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-204ENST00000608295 LRRK2Q5S007 2527 aa13.47□□□□□ -0.25
HDDC2-204ENST00000608295 CLEC18AA5D8T8 446 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 NPIPA5E9PKD4 350 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 PROM1O43490 865 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 ZFAND5O76080 213 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 OR6B1O95007 311 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 SEMA3DO95025 777 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 SP1P08047 785 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 IMPDH1P20839 514 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 SOX3P41225 446 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 HLCSP50747 726 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 GPR143P51810 404 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 TDGF1P3P51864 188 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 GALNT1Q10472 559 aaPredicted RBP13.46□□□□□ -0.25
HDDC2-204ENST00000608295 LCP2Q13094 533 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 INAQ16352 499 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 CFAP157Q5JU67 520 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 OR52E8Q6IFG1 317 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 SLC25A25Q6KCM7 469 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 RPUSD3Q6P087 351 aaKnown RBP13.46□□□□□ -0.25
HDDC2-204ENST00000608295 CLEC18BQ6UXF7 455 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 IL20RBQ6UXL0 311 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 GFRALQ6UXV0 394 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 HSDL2Q6YN16 418 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 MDGA2Q7Z553 956 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 LCA5Q86VQ0 697 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 ZNF227Q86WZ6 799 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 TDRPQ86YL5 185 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 TMEM178AQ8NBL3 297 aa13.46□□□□□ -0.25
HDDC2-204ENST00000608295 CLEC18CQ8NCF0 446 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms