RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 FGF17O60258 216 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 AIFM1O95831 613 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 BPGMP07738 259 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 ALOX15P16050 662 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 HTR6P50406 440 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 PLIN5Q00G26 463 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 FOLH1Q04609 750 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 PLEKHN1Q494U1 663 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 SPDYAQ5MJ70 313 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 CUZD1Q86UP6 607 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 NUDCD3Q8IVD9 361 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 OR4N5Q8IXE1 308 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 ART5Q96L15 291 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 ACPTQ9BZG2 426 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 ARGLU1Q9NWB6 273 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 TRAV17A0A0B4J275 112 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 TRBV11-1A0A0K0K1C0 115 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 OR5H15A6NDH6 313 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 C17orf105B2RV13 164 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 SLC28A1O00337 649 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 BIRC5O15392 142 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 OR10H2O60403 315 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 ZFAND5O76080 213 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 SORBS2O94875 1100 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 ZWINTO95229 277 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 WDPCPO95876 746 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 FGF4P08620 206 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 PIK3R1P27986 724 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 ETV4P43268 484 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 GSTM5P46439 218 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 CD97P48960 835 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 FOXA1P55317 472 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 ID2Q02363 134 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 ZNF169Q14929 603 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 COLEC12Q5KU26 742 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 NDUFAF5Q5TEU4 345 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 TRIM46Q7Z4K8 759 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 CRLF3Q8IUI8 442 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 ST13P4Q8IZP2 240 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 CLYBLQ8N0X4 340 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 HORMAD2Q8N7B1 307 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 OR4K14Q8NGD5 310 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 PTPMT1Q8WUK0 201 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 NCLNQ969V3 563 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 METTL2AQ96IZ6 378 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 UTP23Q9BRU9 249 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 MECRQ9BV79 373 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 SHCBP1LQ9BZQ2 653 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 CDCP1Q9H5V8 836 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 SIRT5Q9NXA8 310 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 PLA2G3Q9NZ20 509 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 COPS7AQ9UBW8 275 aa16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 SMG1Q96Q15 3661 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-212ENST00000596163 FASNP49327 2511 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 MYOCOSA0A1B0GUC4 107 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 GNG14A0A1W2PPG7 69 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 GLOD5A6NK44 160 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 FCHO1O14526 889 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 RGS14O43566 566 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 SLC35E2P0CK97 266 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 CHN1P15882 459 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 SERPINB3P29508 390 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 GALNSP34059 522 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 SERPINB4P48594 390 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 TNFSF10P50591 281 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 HMGCS1Q01581 520 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 BTKQ06187 659 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 INPP5JQ15735 1006 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 ARL13AQ5H913 290 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 GALNT18Q6P9A2 607 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 SCIMPQ6UWF3 145 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 KIF2BQ8N4N8 673 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 APCDD1LQ8NCL9 501 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 OR5L2Q8NGL0 311 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 OR1N1Q8NGS0 311 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 FAM76AQ8TAV0 307 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 CPT1CQ8TCG5 803 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 TM4SF18Q96CE8 201 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 PKNOX2Q96KN3 472 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 OR8D2Q9GZM6 311 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 TEX10Q9NXF1 929 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 WBP11Q9Y2W2 641 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 TRAF6Q9Y4K3 522 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 PCDHA9Q9Y5H5 950 aa16.12■□□□□ 0.17
SHKBP1-212ENST00000596163 PGRMC2O15173 223 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 PCDH7O60245 1069 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 RSL1D1O76021 490 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 SNUPNO95149 360 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 NEFHP12036 1026 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 DRD2P14416 443 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 GPR143P51810 404 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 MLLT10P55197 1068 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 MLF1P58340 268 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 CASP8Q14790 479 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 C6orf163Q5TEZ5 329 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 FCRLBQ6BAA4 426 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 RPUSD3Q6P087 351 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 HSDL2Q6YN16 418 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms